Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03485 ATGGCGACATATTTTCATGGTAATTCGGAAATTCAAGGTGGTGGTGTTGATGGCGGCCTTCAAACTCTTGTCCTCATGAACCCCGGGTACATACAATTCTCCGACACGCCGCCGCCTCCGCCACCACACGGCGGAAACCTTATGCTTCTCAACTCTCTCGCTGCCGCCGGAAACTCCTCCCTCGCATCTCACGCGCCGCTATCACAACAGTTCCTTGGTGTGCCTCTCGCGGCCGAGCACATGCACGGCCACCATGATGTCTCGGTTGCCCTGCATGGTTACGCGCCGCGAGGGCACTACAACCTTTGGAACACAATTGACCCTACTACTGCGGCGCGTGATGCTACACGCGCCACACAAGGACTCTCTCTAAGCCTTCCAGCTATGTCGGGGGACGACGTTCGAGTCTCCGGTGGGTCCCCGTCTTCTGCTTCCGGGGTTACCAACGGTGGAGGCGGTGTTTCGGGAATTCAGAGTGTGTTATTGAATTCAAAGTACTTGAGGGCCACACAAGAGCTTCTAGAAGAGGTTGTGAATGTTAATAATAACAACGATGTTAATAATAATAATAATATGAAGAAGAAGAGTTTTGAGAAGGCTAAGGTTGGTGTCGGAGAATCTTCATCAAACGGTGGTAATAGTGGCGGAGATGGTTCGGTTGGTGAAGGAAGTGAGAAGCGTTGTGCTGAGTTATCAACCACAGAGAGACAAGAAATTCAGATGAAGAAAGCAAAGTTAATCACCATGCTTGATGAGGTGGAGCAAAGATACAGGCAATACCATAATCAAATGCAGATAGTAATATCATCATTTGAGCAAGCAGCTGGGATTGGATCAGCAAGAACATACACTGCCCTTGCATTGCAAACAATCTCAAAGCAATTTAGGTGCTTGAAGGATGCCATAACTGGACAAATTAAAGCTGCAAATAAGAGCTTAGGTGAAGAGGACTACTTTGGTGGTGGTGGAGGCAAAATTGAAGGGTCAAGGCTTAAATATGTTGACCATCATCTAAGGCAACAGAGAGCTATACAACAATTGGGAATGATGCATCACAATGCTTGGAGACCCCAGAGAGGACTCCCGGAGAGATCGGTTTCCGTTCTACGCGCTTGGCTATTCGAACATTTTCTTCATCCTTATCCCAAGGATTCAGACAAACACATGCTTGCAAAACAAACAGGGCTTACAAGGAGCCAGGTATCAAATTGGTTCATAAATGCAAGAGTTAGGCTTTGGAAACCAATGGTGGAGGAAATGTACTTAGAGGAAATGAAGGATCATGATATGAACAATAGTAACAACAACAATGTCTCTGAGGACAACAAATCAAGCAAGAGCAATGAAGATCCAAACAATGCTAAAAATTCGCCACCTCGAGACAGCAATTCTGAATCTGATACCAAAAAGAGCTTCAATTCGAAACAAGAAAACGTTTCAATTTCGACACCAACTTCGCAAATTGGTGGAAATTCAAGGAACAACAACAATAATAATAGTTCAGGATTCAGCTTCATGGGGTCATCAGAATTATTAGATGGAATCACACAAGGTAGTAGTCCTAAGAAGCCAAGGAGCAATGAAATTGTTCATCATAGCCAAAACAATAATAATAATAATAATAACAACAATGAATACTCGTTCATCAATAATGTTGGGAACCAAACAAACTTCATTGGTGGATTTGGACAATACCCTATTGATGAAATTGCAAGATTTGATGCTGCTGCTGCTGAAAATTTTACAAGATTCTCAGGTAATAATAATCATAGTAACAATAATGGTGTATCACTCACTCTTGGTCTTCCACATTGTGACACATTCCAGAACATTCAACTAGGAAGAAGATTGGATCGTATGAGTGGTGAACAACATTCAAATGAGTTTGGTGCAGTTAACAACACTCAAAATCCTCACCACTCTTCAGCTGCATTTCAGAGTATGCAGAATTCAAAGAGGTTTGCTGCACAATTGTTGCCAGATTATGTGGCCTAA 1995 0.4341 MATYFHGNSEIQGGGVDGGLQTLVLMNPGYIQFSDTPPPPPPHGGNLMLLNSLAAAGNSSLASHAPLSQQFLGVPLAAEHMHGHHDVSVALHGYAPRGHYNLWNTIDPTTAARDATRATQGLSLSLPAMSGDDVRVSGGSPSSASGVTNGGGGVSGIQSVLLNSKYLRATQELLEEVVNVNNNNDVNNNNNMKKKSFEKAKVGVGESSSNGGNSGGDGSVGEGSEKRCAELSTTERQEIQMKKAKLITMLDEVEQRYRQYHNQMQIVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQIKAANKSLGEEDYFGGGGGKIEGSRLKYVDHHLRQQRAIQQLGMMHHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEMKDHDMNNSNNNNVSEDNKSSKSNEDPNNAKNSPPRDSNSESDTKKSFNSKQENVSISTPTSQIGGNSRNNNNNNSSGFSFMGSSELLDGITQGSSPKKPRSNEIVHHSQNNNNNNNNNNEYSFINNVGNQTNFIGGFGQYPIDEIARFDAAAAENFTRFSGNNNHSNNNGVSLTLGLPHCDTFQNIQLGRRLDRMSGEQHSNEFGAVNNTQNPHHSSAAFQSMQNSKRFAAQLLPDYVA 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03485 664 SMART prehox3 155 304 IPR006563 -
Arst2g03485 664 SMART HOX_1 355 419 IPR001356 GO:0003677
Arst2g03485 664 MobiDBLite consensus disorder prediction 136 151 - -
Arst2g03485 664 SUPERFAMILY Homeodomain-like 356 422 IPR009057 -
Arst2g03485 664 CDD homeodomain 355 416 IPR001356 GO:0003677
Arst2g03485 664 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 80 442 - -
Arst2g03485 664 Pfam Homeobox KN domain 372 411 IPR008422 GO:0003677|GO:0006355
Arst2g03485 664 ProSiteProfiles 'Homeobox' domain profile. 352 415 IPR001356 GO:0003677
Arst2g03485 664 MobiDBLite consensus disorder prediction 627 646 - -
Arst2g03485 664 FunFam BEL1-like homeodomain protein 9 358 420 - -
Arst2g03485 664 MobiDBLite consensus disorder prediction 426 546 - -
Arst2g03485 664 Pfam Associated with HOX 160 303 IPR006563 -
Arst2g03485 664 MobiDBLite consensus disorder prediction 473 546 - -
Arst2g03485 664 MobiDBLite consensus disorder prediction 201 235 - -
Arst2g03485 664 MobiDBLite consensus disorder prediction 124 151 - -
Arst2g03485 664 Coils Coil 236 263 - -
Arst2g03485 664 Gene3D - 350 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03485 Arst-Chr2 91697448 91703739 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03485 1 664 Homeobox Transcription Factor Family AT2G35940 45.491 1.03e-164 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Arst2g03485 POX 9.3e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03485 - - gmx:100791773 701.434