Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03481 ATGGATCATGGAATTGATGTTCCACCATTTTTTGTTTGTCCAATTTCATTGGAGATCATGAAGGATCCGGTGATTGTATCCACAGGAATCACCTATGATAGAGAGAGCATTGAGAAGTGGTTATTGAAGAACAAGACATGCCCGGTGACCAAGCAAACCCTTGAGATTTTAGACCTAACTCCTAATCACACTCTTAGGAGATTGATTCAAGCATGGTGCACTTTGAATGCTTCTCATGGAGTTGAAAGAATTCCAACACCAAAGCCTCCGGTCAATAAAGAACAGGTATCAAAGCTCATCAAAGATGCTTCTTCTAATGATCAAGATTCTTCATTGCTTTCTCAGTGCCTTGTGAGCCTTAAATCGATGGCGGCCGAGAGCGAATCGAACCGGAGATGCATTGAATCAGCTGGAGCTGTTGAGTTCTTAGCTTCAATAGTTGTGATGAATCATGGTTATGATTCAATTGAGGTTAGTTCTGATGGAGATGAAGGTTTCGACACGAAATCGGGCGTTTCGGATGAAGCTTTGAGCATACTAAACAATCTTCATTTGTCAGAAAATGGTTTGAAGGCCTTATTAGGGTTCAAAGATGGAATCTTTGTTGATTCCTTGACAAGGGTCTTGCAAAGAGGAATCTATGAATCAAGGGCTTATGCAGTTTTCTTGTTGAAATCCATGTCCCAAGTTGCAAACCCTAACCAGCTAGTGAATCTTAGAAATGAATTGTTTGTGGAATTGGTTCAAGTTCTAAAGGATCAAATCTCACAAAAAGCTTCAAAGGAAACACTAGAAACCCTAATTGAGATTTGTCCATGGGGCAGAAACCGGATCAAAGCGGTCGAATCCGGGGCGATCCATGTCCTTATTGAGCTTCTTCTTGATTGCAAAGAGAAGAAGCCATGTGAGATGATGATGGTGGTCTTGGATATTCTATGCCAAACTGCTGATGGAAGAGCTGAGCTTCTCGGCCACGCTGCCGGCGTGGCCGTCGTTTCGAAGAAGATTCTTAGGGTTTCAACATTGGTGAATGATAGGGCTGTGAAGATTTTGCTCTCAATTGCAAGGTACTCAGCAACACAAAGTGTTGTTCAAGAAATGTTGCTAATTGGTGTTGTTGCTAAACTTTGTTTGGTTCTTCAAGTTGATAGTGGAAACAAGGCTAAGGAGAAAGCAAGGGAAATTCTCAAGCTTCATTCTAAAACATGGAGGAATTCTCCTTGTTTACCTACCAATTTTCTTTCTGCTTACCCTACAAATTAG 1263 0.4133 MDHGIDVPPFFVCPISLEIMKDPVIVSTGITYDRESIEKWLLKNKTCPVTKQTLEILDLTPNHTLRRLIQAWCTLNASHGVERIPTPKPPVNKEQVSKLIKDASSNDQDSSLLSQCLVSLKSMAAESESNRRCIESAGAVEFLASIVVMNHGYDSIEVSSDGDEGFDTKSGVSDEALSILNNLHLSENGLKALLGFKDGIFVDSLTRVLQRGIYESRAYAVFLLKSMSQVANPNQLVNLRNELFVELVQVLKDQISQKASKETLETLIEICPWGRNRIKAVESGAIHVLIELLLDCKEKKPCEMMMVVLDILCQTADGRAELLGHAAGVAVVSKKILRVSTLVNDRAVKILLSIARYSATQSVVQEMLLIGVVAKLCLVLQVDSGNKAKEKAREILKLHSKTWRNSPCLPTNFLSAYPTN 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03481 420 ProSiteProfiles U-box domain profile. 6 79 IPR003613 GO:0004842|GO:0016567
Arst2g03481 420 Gene3D - 76 402 IPR011989 -
Arst2g03481 420 SUPERFAMILY RING/U-box 5 78 - -
Arst2g03481 420 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 75 IPR013083 -
Arst2g03481 420 FunFam RING-type E3 ubiquitin transferase 1 82 - -
Arst2g03481 420 CDD RING-Ubox_PUB 8 59 IPR045210 -
Arst2g03481 420 PANTHER WDSAM1 PROTEIN 5 410 IPR045185 GO:0061630
Arst2g03481 420 SMART Ubox_2 10 72 IPR003613 GO:0004842|GO:0016567
Arst2g03481 420 SUPERFAMILY ARM repeat 95 402 IPR016024 -
Arst2g03481 420 Pfam U-box domain 7 74 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03481 Arst-Chr2 91653930 91655630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03481 1 418 U-box Gene Family AT3G52450 55.125 6.09e-168 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03481 - - gmx:100809123 584.334