Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03480 ATGGAGAGTGTGTGGAAGCCTAATGTTGAGATATCCCCAAATTGCCCTCGGTGTGGTTCCTCCAACACAAAGTTTTGCTACTACAACAACTACAGCTTAACTCAACCAAGGTACTTTTGCAAGGGCTGTAGAAGGTACTGGACAAAAGGTGGGTCCCTCCGGAACGTTCCGGTCGGCGGCGGCTGCCGGAAGAATAGAAGAGGTAATAAAACCCTAAGACAATCCCTTGAAGGCCTTAATTTCAAGAATTCATCATCATCACCATCACATGATCATACCTCAAATAACCCTAACCCTAACCCTAACTCTATTATTGGCCATCATCATTCTAATAGATCCTCATCACCAGTGATAGCTGATGGACCAAACATTGACCTTGCCCTAGTTTATGCAAATTTCCTCAATCAAAAGCCAAATTCAGGAGATGGGGTGGTTGAGAATAATAACAATAATCAAGATCATCATCATCAATTATTGCAACCAGTTTTTGATGATCCTTCTCTAGAAGATGGTCCAAGTAGTACTAATTTTCCTCCTCATCAAGAGTTTGGTCTTAATGGATGTATAAATCTTCCTGAGCTACCCAAATTTGTTGGTGAGGGAAATAATAACCATCAAATGTACTTAAAAGAGTTCAACTCTTCTATGGAGATTCATCATCCAAGGGATAATAATAATAACAATGATGGACCAATTGAGCATTGTAGTATCAATACTTTTGAGTTGCCACCATTACCGGGTGATGAAGAAGCCTCACATCATCATCATCATCATCATTTGATGTGGTCAAATGATAACAATCCTGAGATGATAATGGTGAACCATGATGCCTTTCATGATCAAATAGCCACACATCATCATCATCATCATCATCCACCACTTTTTGGGAGTGAAGCTCATCATGATGCTGACTTGTTAATTGGTAATTGGAGCCCCTTTGATTTGCCATCATCAAATGATGCTTCTTCATTTTCTAGGCATCGATGA 987 0.3992 MESVWKPNVEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGNKTLRQSLEGLNFKNSSSSPSHDHTSNNPNPNPNSIIGHHHSNRSSSPVIADGPNIDLALVYANFLNQKPNSGDGVVENNNNNQDHHHQLLQPVFDDPSLEDGPSSTNFPPHQEFGLNGCINLPELPKFVGEGNNNHQMYLKEFNSSMEIHHPRDNNNNNDGPIEHCSINTFELPPLPGDEEASHHHHHHHLMWSNDNNPEMIMVNHDAFHDQIATHHHHHHHPPLFGSEAHHDADLLIGNWSPFDLPSSNDASSFSRHR 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03480 328 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 11 192 IPR045174 GO:0003700|GO:0006355
Arst2g03480 328 MobiDBLite consensus disorder prediction 79 118 - -
Arst2g03480 328 ProSiteProfiles Zinc finger Dof-type profile. 13 67 IPR003851 GO:0003677|GO:0006355
Arst2g03480 328 ProSitePatterns Zinc finger Dof-type signature. 15 51 IPR003851 GO:0003677|GO:0006355
Arst2g03480 328 Pfam Dof domain, zinc finger 14 67 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03480 Arst-Chr2 91645951 91647002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03480 4 317 C2C2-Dof Transcription Factor Family AT3G52440 37.812 3.83e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst2g03480 zf-Dof 5.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03480 - - adu:110277481 650.973