Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03466 ATGAACGACCTATTTTCCGGTTCCTTCTCCCGCTTGCGCAACGAACGTACTTCACCGGACCGCCACCACGTCATCGAGATGTCTGCCGTCACGCCGGACGCTGCAGGCTCGGGCGGCGTCCACCTCGACAAGTTCTTCGACGATGTCGAAGGCGTTAAAGAGGAGCTTCGCGAAGTCGAGCGTCNNNNNNNCGAGCGTCTTCTCCAGAGTCTCCAGAGCAGCCACGAGCAGAGCAAGACGCTTCACAACGCCGCCGCCGTGCGTGACCTCCGGTCGAGAATGGACGCCGACGTATCGGCGGCGCTGAAGAAGGCGAAGGTGATCAAGCTCCGCCTCGAGGCGCTGGACCGGTCCAACGCTGCGAACCGGAACCTGCCGGGTTGCGGACCGGGTTCGTCATCGGACCGGACGAGAACTTCGGTGGTTAACGGTTTGAAGAAGAAGCTGAAGGATTCGATGGAGAGCTTCAATGAATTGCGGCAACAGATCTCGGCGGAGTATAGGGAGACGGTGCAGCGGCGGTACTTCACCGTCACCGGCGAGAATCCCGATGAGAAGACGCTCGATCTCTTGATCTCTACTGGTGAGAGTGAGACATTCCTTCAGAAAGCCATTCAAGAACAAGGCAGGGGAAGAATTCTTGACACCATCAATGAAATTCAAGAAAGGCATGATGCTGTCAAAGAGATCGAGAAGAATCTCAAGGAGTTGCACCAGGTGTTCCTTGACATGGCAGTGCTGGTGCAAACACAGGGCGAGCAACTGGACGATATTGAGAGCCACGTGGCGCGAGCCCATTCGTTTGTGCACACTGGAACAGAGCAGTTGCAAACTGCAAGAAAGCACCAGAAGAACACCAGGAAATGGACCTGTTTTTGTATCATACTGCTTCTAGCGATTATCTTGGTAGTGTTGCTAGTGGTTCTGAAACCGTGGCAACATAATGGCAGCAGTGGTGGTGGTAGTCAGCCTGCTCCGGCTCAAACACCTCCACCACCACCTCCTGCCGGTGCTTAA 1017 0.5506 MNDLFSGSFSRLRNERTSPDRHHVIEMSAVTPDAAGSGGVHLDKFFDDVEGVKEELREVERXXXERLLQSLQSSHEQSKTLHNAAAVRDLRSRMDADVSAALKKAKVIKLRLEALDRSNAANRNLPGCGPGSSSDRTRTSVVNGLKKKLKDSMESFNELRQQISAEYRETVQRRYFTVTGENPDEKTLDLLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKEIEKNLKELHQVFLDMAVLVQTQGEQLDDIESHVARAHSFVHTGTEQLQTARKHQKNTRKWTCFCIILLLAIILVVLLVVLKPWQHNGSSGGGSQPAPAQTPPPPPPAGA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03466 338 ProSitePatterns Syntaxin / epimorphin family signature. 223 262 IPR006012 GO:0005484|GO:0006886|GO:0016020
Arst2g03466 338 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 217 279 IPR000727 -
Arst2g03466 338 MobiDBLite consensus disorder prediction 316 338 - -
Arst2g03466 338 PANTHER SYNTAXIN 63 300 IPR045242 -
Arst2g03466 338 Gene3D - 214 310 - -
Arst2g03466 338 Coils Coil 42 61 - -
Arst2g03466 338 Pfam Syntaxin 44 252 IPR006011 GO:0016020
Arst2g03466 338 Coils Coil 142 166 - -
Arst2g03466 338 Coils Coil 65 69 - -
Arst2g03466 338 Gene3D - 40 177 - -
Arst2g03466 338 SUPERFAMILY t-snare proteins 40 272 IPR010989 GO:0016020|GO:0016192
Arst2g03466 338 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 39 174 - -
Arst2g03466 338 FunFam Syntaxin 132 210 310 - -
Arst2g03466 338 SMART tSNARE_6 212 279 IPR000727 -
Arst2g03466 338 CDD SNARE_syntaxin1-like 216 278 - -
Arst2g03466 338 CDD SynN 42 204 IPR006011 GO:0016020
Arst2g03466 338 Pfam SNARE domain 253 305 IPR000727 -
Arst2g03466 338 SMART SynN_4 37 168 IPR006011 GO:0016020
Arst2g03466 338 Coils Coil 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03466 Arst-Chr2 91564026 91566097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03466 34 336 SNARE and Associated Proteins AT3G11820 72.756 6.84e-152 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03466 K08486 - gmx:100809258 474.167