Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03451 ATGGGTATGGAAACTGCATATCTGAAAGAACATGAAGGAATTGTTCACAATTCTGTTGGACAGCTGTCATCAGCATCAGCAGCAGCAGGTTCTTCATGGTGGAGTATTAGTGCCTTTGGATCTCATCAAAATCAATCATCAGTTTATGGAGAGACTTCTAATTATAATAATAATAATAATAACCAAATTATGAAACCATTTTCATTGGAGCTTCATAATAATAATTACATAGACCAACTTGCTTCTTCCGCTAATAAGCAACAACAATTCTTGGATAAAGGACCTACAACACAATTTACCATCTTTCCAGATTGCAAAATTTCAGGTGAATCCCAAAAGTCTCAAGCCACATTATCTTTGCAGCCATCAAATGCTGACCCTAGGAACCGTTTTGAGCTTGGATTCACTCAGCCTGTGATATGTGCAAAATATCCTTACATGGATCAATTTTATGGACTCTTCTCAGCTTATGCACCTCAAATTTCGGGGCGTATAATGCTGCCACTAAACTTGACATCAGATGATGGACCAACTTACGTGAATGCTAAGCAATACCATGGAATCATAAGGCGTAGGCAGTCACGTGCCAAAGCTGTTCTTGCCAATAAACTCATCAAACGTCGCAAGCCATATATGCATGAATCGCGCCATCTCCATGCCATGCGACGGCCAAGAGGATGTGGTGGCAGGTTCTTGAACACAAGAAATCCTGCCACCAACAATGGAAATGGCAAGAGTGGAAGTGAAACAAACAAAAAAGGACTTGGCCATCAACTACATTCTAGTGGTTCTCAGAATTCTGAAGTCCTACAATCCTCGGCCGGAACCTTGAATTCATTGAAGGAAGCAAATGGAAGCAGTCCAAACATTTCATTAGAGGTGACAAGCATGTACTCATCAAGAGGAGGAATTGATGGATTTGCCATCAATCACATTGGAACTCCTATGCACTCCCTTGCAGATATGATGGACACTGGACACGGACATGGCATGATCATGCCCCCGAAATGGGTTTCAGCTGCGGCCGGAAACTGCTGCAACCTTAATGTTTGA 1053 0.4188 MGMETAYLKEHEGIVHNSVGQLSSASAAAGSSWWSISAFGSHQNQSSVYGETSNYNNNNNNQIMKPFSLELHNNNYIDQLASSANKQQQFLDKGPTTQFTIFPDCKISGESQKSQATLSLQPSNADPRNRFELGFTQPVICAKYPYMDQFYGLFSAYAPQISGRIMLPLNLTSDDGPTYVNAKQYHGIIRRRQSRAKAVLANKLIKRRKPYMHESRHLHAMRRPRGCGGRFLNTRNPATNNGNGKSGSETNKKGLGHQLHSSGSQNSEVLQSSAGTLNSLKEANGSSPNISLEVTSMYSSRGGIDGFAINHIGTPMHSLADMMDTGHGHGMIMPPKWVSAAAGNCCNLNV 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03451 350 Gene3D - 174 236 - -
Arst2g03451 350 PRINTS CCAAT-binding transcription factor subunit B signature 177 199 IPR001289 GO:0003700|GO:0006355
Arst2g03451 350 PRINTS CCAAT-binding transcription factor subunit B signature 208 231 IPR001289 GO:0003700|GO:0006355
Arst2g03451 350 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 44 287 IPR001289 GO:0003700|GO:0006355
Arst2g03451 350 MobiDBLite consensus disorder prediction 233 271 - -
Arst2g03451 350 ProSiteProfiles NF-YA/HAP2 family profile. 174 234 IPR001289 GO:0003700|GO:0006355
Arst2g03451 350 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 177 231 IPR001289 GO:0003700|GO:0006355
Arst2g03451 350 MobiDBLite consensus disorder prediction 223 271 - -
Arst2g03451 350 SMART cbf3 173 234 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03451 Arst-Chr2 91390557 91395933 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03451 131 348 CCAAT-HAP2 Transcription Factor Family AT3G05690 47.598 1.11e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Arst2g03451 CBFB_NFYA 7.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03451 K08064 - gmx:100808195 413.305