Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03447 ATGAGCAACAACAACACAACTAGTGATTCTTCTTCAGGATTCCTTGGATCCAATGACATAAGTGGATTTGGCTATGGCATTGGAATCTCAATTGGGATTCTTCTACTCATCACAACAATCACACTCACCTCATACTTTTGCACAAGAACACAAGTTCCAAATAGTAACAACAGTAGGAGTAGGAGTAATCCTACTCCAGGTTCAAGGAGGAGCACCCAAGTATTCCTCGAACCACAACACACCGTGGTCGATGTGGGACTAGATGAAGCAACAATTCTTGGGTACCCAAAGATGCTTTACTCAGAATCAAAGAAACTCAACAAGAAATCTGATGATTCAACATCAACATGTTGTTCAATTTGTCTTGGAGATTATAAGGGAAGTGATATGCTTAGAGTGTTACCAGATTGTGAACATGTTTTTCATCTAAAGTGCATAGATCCATGGTTGAGATTGCATCCAACTTGTCCTCTTTGCAGAACATCACCAATTCCAACACCACTTTCTACTCCTCTTGCTGAGGTTGTTCCATTAGCAACCAGGAGAGATTGA 552 0.4058 MSNNNTTSDSSSGFLGSNDISGFGYGIGISIGILLLITTITLTSYFCTRTQVPNSNNSRSRSNPTPGSRRSTQVFLEPQHTVVDVGLDEATILGYPKMLYSESKKLNKKSDDSTSTCCSICLGDYKGSDMLRVLPDCEHVFHLKCIDPWLRLHPTCPLCRTSPIPTPLSTPLAEVVPLATRRD 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03447 183 Pfam Ring finger domain 118 160 IPR001841 -
Arst2g03447 183 SMART ring_2 118 159 IPR001841 -
Arst2g03447 183 CDD RING-H2_EL5-like 117 160 - -
Arst2g03447 183 MobiDBLite consensus disorder prediction 52 73 - -
Arst2g03447 183 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 174 IPR045899 -
Arst2g03447 183 SUPERFAMILY RING/U-box 117 165 - -
Arst2g03447 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 164 IPR013083 -
Arst2g03447 183 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03447 Arst-Chr2 91378536 91379379 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03447 10 181 C3H Transcription Factor Family AT5G06490 50.273 9.02e-58 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03447 - - gmx:100796149 237.269