Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03443 ATGGGTCGTGGAAAAACGGTCTATGAATGCATCAAAAACGAACGAGAACGTAAAATTTCTTTCATGCAAAGAAAAGATGGAATCATGAAGAAAATTGCAACATTTTCAAAGTTATGTAAAGTTGAAGCTTGTCTAATTATTTATGGAGATGATTCTTCTCAACCAATGATTTGGCCACAAGAACATTCAAAGGTGCAATCCATAATTGAAAAATACGAGGTTCAAAAGAACAATGAGACACGCCCCATAATCTTTGATGAAGAAGAATTTTTCAAGAACAAGAAGATCATGATTGAGGCTGAGATTTCTAAATTGAGAAAGAAGGTACTCAAATTCAAGTATCCTACCATGGATCCAATTTTTACCACCTTAGATGGGAACCAATTGATGGAGTTCATTGCTTTGGTGAACACTAAAATTGAAGCTTGTAAGAAAAGAATTGACATGTTGAAGGAGAGTAATCAAGATAATGGTAGCAACTTCAATGTTGACCAAAGTCAAAGTCAACTCAATTTCATGAACAACATTCCTAATCATGATTATGCTCTTCATCATGATAATTTGGTATATCAAACTCAAAACCCTAAGTTTGATCCAAATGTTACTTATTTTGTGGCAAACAACAATGGGGTGATTATGGATTCTACTAGCCAAGTTAATGTGTCTCTAGATTGTTCTACTACAAATCAAGTTGCGGTTATGGATTCTAAAGAAAAGAATGTTATTGTGGATTCTACAAATCAAATCAGCAAAGATGGTGATCTTATTAATTGGGATGATTTTATTGAGGTTGAGAATTGGATTGATCAACTTCAATATGAGACTAATTTAAAAGACATTCTTTCTCATCAATCTCAGAATGTGTCACAATCTTCACAAATCTTGCCACCAATAACAATGAATGGATTTTTGGCTGATGAGAAGAACAATAACCACCAATTCCAGTCATTCAACATGTAA 960 0.3344 MGRGKTVYECIKNERERKISFMQRKDGIMKKIATFSKLCKVEACLIIYGDDSSQPMIWPQEHSKVQSIIEKYEVQKNNETRPIIFDEEEFFKNKKIMIEAEISKLRKKVLKFKYPTMDPIFTTLDGNQLMEFIALVNTKIEACKKRIDMLKESNQDNGSNFNVDQSQSQLNFMNNIPNHDYALHHDNLVYQTQNPKFDPNVTYFVANNNGVIMDSTSQVNVSLDCSTTNQVAVMDSKEKNVIVDSTNQISKDGDLINWDDFIEVENWIDQLQYETNLKDILSHQSQNVSQSSQILPPITMNGFLADEKNNNHQFQSFNM 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03443 319 Gene3D - 13 96 IPR036879 GO:0003677|GO:0046983
Arst2g03443 319 ProSiteProfiles MADS-box domain profile. 1 50 IPR002100 GO:0003677|GO:0046983
Arst2g03443 319 CDD MADS 2 59 - -
Arst2g03443 319 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Arst2g03443 319 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 51 IPR002100 GO:0003677|GO:0046983
Arst2g03443 319 SUPERFAMILY SRF-like 1 74 IPR036879 GO:0003677|GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03443 1 144 Type I MADS-box Gene Family AT2G28700 31.757 2.60e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Arst2g03443 SRF-TF 4.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03443 - - adu:107476111 638.647