LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst2g03403	ATGGCTGCAAAACTTGGGGGTAGAGCTTATCTCTCTTCCTTTGTTGATGGTGTTTTGAACAAGCTGTCGTCCCTTGATGTCAACTCAACCCCAGAAGCAAAGAAGTTAGCTGACCAGAAGTTGTTTCGAAGACTGAAAGCGAGTCTCCGTGCCACTCGACCTGTGCTTGATGATGCTGAGCAGAAGCAGATCCGAGACCAAGAAGTCAACAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATTTGGCTGATGATCTTCTGGATGAACTCTCCACGAAAGCTGCCACCGTCCCTCCCACTCCCACTCCCACTCAGAGGGATCCAGGTAACTCTTCTTCCTGGTCTCACTATGTTGATTCAATTTTGGAAGATAGTGATGACGATGAGATGGGGGTAGTGACTAGCATGCAAGACATAGTTGACAAACTAGAGTCTATTGTTGAAGAGAAAGATGATCTTGATCTGAAACAAGGGGTTGCCAAAGATCTGGAGGACATGTCATGGAGAATTCAATCATCTCTGCTTGAAAGTTCTGATATATATGGCAGGAACAATGACAAGGAGGCCATCATAAAATTGTTACTCGATGAAACTTGTGATGATATATTGTCTGTGATCTCTATAGAAGGTATTGGTGGAATTGGAAAGACTACCTTGGCTCAGTTAGTTTACAATGATGCCAGAGTGAAGGAGAAGTTTGCCATTAAAGCATGGGCGTGTGTTGCAACAAAATTTGATCCTGTTATTGTTACCAAGTCTATAATGGAAGACATAGCTTCTCCTTGTAATAAGGTTAACTTGAATTCGATTCAAACCGAATTGAAGGAAAAGTTAACAGAAAAGACATTCTTGGTAGTTTTAGATGATGTTTGGGATAATCAGCAAAATTTGTGGGACAATTTTCTAAAACCTTTTTTGAGTGGAAATAAAGGAAGTAAAATTCTTTTAACTACTCGTATTAAAAATGTTGATTCTGTAGTGTCAACTACAAATCTACATTATAAACTAGATACATTGTCCAACGAAGATTGCTGGTCTTTGTTTTTGAAACATTCATCTATTTCTACTAGTTCTAGACAATATGAAATCTTAGAACAAATTGGTAAAAAAATTGTTGAAAAATGCAAGGGATTACCTTTGGCTGTGAAGACACTTGGGGGTTTATTGCGGAGTAAGGATAAAGTAGAGGATTGGGAGAATTTACTGAGAAGTGAAATTTGGGAGCTAAATGAAGATGAGAGTAAGATTGTTGCTGCATTAAGAGTTAGTTATCACTATCTTCCTTCAAATTTAAAGCGGTGTTTTGTTTATTGCTCGTTATATCCCCAAGATTATCAATTTGACAAAGATGAATTAATCTTGCTGTGGATGGCTGAAGATCTCTTACAACCAATGGAAAAAAACACATTAGAAAATATTGGTTGTGCTTATTTTGAGGAATTAGTTGCAAGATCATTTTTTCAACTTTCTAGTAAAGGTGCTGGCTTATTTGTAATGCATGATCTCATGCATGATTTAGCATCATTTTTTGCTGAAAAATTCTATTTCAGAGTCAGAGAATTAGGAGATCCACAAAAGATTTGCAGCAAAACTCGTCATTTGTCATACATGGTAAATCCCGATGATTCAAGATTTGGAGAGGCCTACAAGGGAGCAATACATATGAGAACGTTTCTAAATGTATGTCGTGGTCCTCTATCAATTACGTTAGAAAGTGATTCTTTGCTCTTACAATTACAAATGAGGTATCTAAGAGTTTTGTCATTTAAACGTTTTTCTATTGAATCATTGCCTGATTCAATAGATAAACTGATCCATTTGCATTATTTGGATCTCTCTTATACATCTATTTTGACATTGTCCGAGTCATTGTGTAAATTATACAATCTCCAAACATTGAAGTTGAGTTATTGTAAGAAGCTGGAGATGCTTCCTAGCCGTATGCAAGATCTTGTGAACCTGCGCCATCTTGATACCAGAGGATCTAATTCTTTGAAAGAGATGCCGAAGGGAATGAGCAAGTTAAAGCACCTGAACTTCTTAAGTGGTTATATTGTCGGGGAGCAAGTGGAGAATGGGATAAGAGAATTGGGAGCACTTGACAATCTTCATGGCAAACTTTGTATTTCCAAATTACAGAATGTGAAAGACAGCGATGAAGCTTTGGAGGCAAAGATGGATAGCAAGGAGCACATCAGCATTTTAGAATTGAAGTGGCGTAGAGAAGGTGATACTGTTGATGTTGAAACTGCAAGAGATATACTTGAGGAGTTGCAACCTCACAGAAACTTGAAAGAGTTATCAATTGATGGTTATAGGGGTGAAATATTCCCTGATTGGTTAGGCCTTTCTTGCTACTCCAATTTAACCGACTTGAGTATGTATCGTTGTAAGAATTGCCGTCAGCTTCCTTCACTGGGACAGTTACCCTCTCTAAAGGATCTCAGGATTTTTGAATTCGATGGGTTGGAGAGAATTGGTGGTGAGTTTTACAACAACGCTGAATCATCTCATCAGGGCACACCCTTCAGATCTCTTCAAACTCTGGAATTTGCTCATATGCCTCGCTGGCGAGAGTGGCATATTCCTGATGACTTTGATGGATTTCCCAAACTTAAAAGCCTTTCCATAGTCAACTGTCCGGTGTTAAGTGGAGATCTGCCTGCTCACCTTCCAGCTCTGGAGAAACTTAACATTGTTGACAGCGACGAGCTTGCATGTTCACTGCCGAGAGCTCCCAAGCTTCACCAATTACTTGTAATGGGTCCTTTGTATGAGTCTGAGGGGTATAAGCATTTATCGAAACCGCATGAGGTAGTAATTTTAGAAACTTTGCTTACCAAGTCCGTATTGGAGTGCCTGCCCCACATCCAATGTTCGTGTGTCCAACGTTTGACAATCGAGAATCTTTGGCCAGCAATATCAGTTTCAGGAGATAATTTGCCCGATTCATTACAATATCTGCAAATCACTGGGTGTTCAGACTTATTCTCAGGGCCACTGCATTCCAAGTCCCTAACTGAGATACTTGTCCAAGAATGTGATTCACTGACGTTGTTGCCATTGGGGGCCCTTCCAAATCTGAAGACACTCTCTATCATAGATTGCCCAGAAATGGATTGTTTTGGAGAGGAGTGCCTCCCGCCGAGCTTGACAACCCTTCGGATCAGAAGATGCCAAAAACTAGAGAGGTGGATAACTTGGAGGGGTTTGCAGAGTGAAGGCCTTACCCGTCTTTTCCTTGAAGACTGGGATGAAGTTAAGTCGTTCCCGAGAGAGGGTTGCCTTCCTGCTTCCCTCCAGTATCTATCTTTGTCGTACTTTTCAAATCTGGAGACGCTAGACTGCAAGGGCCTTCACCAACTCACCGCCCTCCAAAAATTAAAAATTAAATACTGTAGCAAGCTGGAGAATATCACACAAGAAAACCTGCCTGCCTCCTTATCAAAATTCATCATCAACAGTGAATGTCCATTGAGGAGTAAGCTGGAAGAGATGAACGACCCACGAATTCAATTCGACACAGACTAG	3531	0.403	MAAKLGGRAYLSSFVDGVLNKLSSLDVNSTPEAKKLADQKLFRRLKASLRATRPVLDDAEQKQIRDQEVNKWLVDLQDALYLADDLLDELSTKAATVPPTPTPTQRDPGNSSSWSHYVDSILEDSDDDEMGVVTSMQDIVDKLESIVEEKDDLDLKQGVAKDLEDMSWRIQSSLLESSDIYGRNNDKEAIIKLLLDETCDDILSVISIEGIGGIGKTTLAQLVYNDARVKEKFAIKAWACVATKFDPVIVTKSIMEDIASPCNKVNLNSIQTELKEKLTEKTFLVVLDDVWDNQQNLWDNFLKPFLSGNKGSKILLTTRIKNVDSVVSTTNLHYKLDTLSNEDCWSLFLKHSSISTSSRQYEILEQIGKKIVEKCKGLPLAVKTLGGLLRSKDKVEDWENLLRSEIWELNEDESKIVAALRVSYHYLPSNLKRCFVYCSLYPQDYQFDKDELILLWMAEDLLQPMEKNTLENIGCAYFEELVARSFFQLSSKGAGLFVMHDLMHDLASFFAEKFYFRVRELGDPQKICSKTRHLSYMVNPDDSRFGEAYKGAIHMRTFLNVCRGPLSITLESDSLLLQLQMRYLRVLSFKRFSIESLPDSIDKLIHLHYLDLSYTSILTLSESLCKLYNLQTLKLSYCKKLEMLPSRMQDLVNLRHLDTRGSNSLKEMPKGMSKLKHLNFLSGYIVGEQVENGIRELGALDNLHGKLCISKLQNVKDSDEALEAKMDSKEHISILELKWRREGDTVDVETARDILEELQPHRNLKELSIDGYRGEIFPDWLGLSCYSNLTDLSMYRCKNCRQLPSLGQLPSLKDLRIFEFDGLERIGGEFYNNAESSHQGTPFRSLQTLEFAHMPRWREWHIPDDFDGFPKLKSLSIVNCPVLSGDLPAHLPALEKLNIVDSDELACSLPRAPKLHQLLVMGPLYESEGYKHLSKPHEVVILETLLTKSVLECLPHIQCSCVQRLTIENLWPAISVSGDNLPDSLQYLQITGCSDLFSGPLHSKSLTEILVQECDSLTLLPLGALPNLKTLSIIDCPEMDCFGEECLPPSLTTLRIRRCQKLERWITWRGLQSEGLTRLFLEDWDEVKSFPREGCLPASLQYLSLSYFSNLETLDCKGLHQLTALQKLKIKYCSKLENITQENLPASLSKFIINSECPLRSKLEEMNDPRIQFDTD	1176

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst2g03403	1176	FunFam	Probable disease resistance protein At1g63360	424	509	-	-
	Arst2g03403	1176	SUPERFAMILY	RNI-like	773	1151	-	-
	Arst2g03403	1176	PANTHER	DISEASE RESISTANCE PROTEIN RP	53	877	IPR044974	GO:0006952
	Arst2g03403	1176	Gene3D	-	423	508	IPR036388	-
	Arst2g03403	1176	Gene3D	Ribonuclease Inhibitor	1045	1160	IPR032675	-
	Arst2g03403	1176	Pfam	NB-ARC domain	185	424	IPR002182	GO:0043531
	Arst2g03403	1176	PRINTS	Disease resistance protein signature	625	641	-	-
	Arst2g03403	1176	PRINTS	Disease resistance protein signature	277	291	-	-
	Arst2g03403	1176	PRINTS	Disease resistance protein signature	375	389	-	-
	Arst2g03403	1176	PRINTS	Disease resistance protein signature	205	220	-	-
	Arst2g03403	1176	Pfam	Rx N-terminal domain	15	96	IPR041118	-
	Arst2g03403	1176	Gene3D	-	172	338	IPR027417	-
	Arst2g03403	1176	MobiDBLite	consensus disorder prediction	93	113	-	-
	Arst2g03403	1176	Gene3D	-	15	123	-	-
	Arst2g03403	1176	Gene3D	-	339	422	IPR042197	-
	Arst2g03403	1176	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	169	438	IPR027417	-
	Arst2g03403	1176	SUPERFAMILY	L domain-like	498	902	-	-
	Arst2g03403	1176	MobiDBLite	consensus disorder prediction	95	113	-	-
	Arst2g03403	1176	Gene3D	Ribonuclease Inhibitor	557	937	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst2g03403	Arst-Chr2	91053303	91073220	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst2g03403	175	686	WRKY Transcription Factor Family	AT5G45050	21.724	1.76e-09	60.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst2g03403	-		-	aip:107628003	1437.94