LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst2g03402	ATGGCTGCAAAACTTGGGGGTAGAGCTTATCTCTCTTCCTTTGTTGATGGTGTTTTGAACAAGCTGTCGTCCCTTGATGTCAACTCAACCCCAGAAGCAAAGAAGTTAGCTGACCAGAAGTTGTTTCGAAGACTGAAAGCGAGTCTCCGTGCCACTCGACCTGTGCTTGATGATGCTGAGCAGAAGCAGATCCGAGACCAAGAAGTCAACAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATTTGGCTGATGATCTTCTGGATGAACTCTCCACGAAAGCTGCCACCGTCCCTCCCACTCCCACTCCCACTCAGAGGGATCCAGGTAACTCTTCTTCCTGGTCTCACTATGTTGATTCAATTTTGGAAGATAGTGATGACGATGAGATGGGGGTAGTGACTAGCATGCAAGACATAGTTGACAAACTAGAGTCTATTGTTGAAGAGAAAGATGATCTTGATCTGAAACAAGGGGTTGCCAAAGATCTGGAGGACATGTCATGGAGAATTCAATCATCTCTGCTTGAAAGTTCTGATATATATGGCAGGAACAATGACAAGGAGGCCATCATAAAATTGTTACTCGATGAAACTTGTGATGATATATTGTCTGTGATCTCTATAGAAGGTATTGGTGGAATTGGAAAGACTACCTTGGCTCAGTTAGTTTACAATGATGCCAGAGTGAAGGAGAAGTTTGCCATTAAAGCATGGGCGTGTGTTGCAACAAAATTTGATCCTGTTATTGTTACCAAGTCTATAATGGAAGACATAGCTTCTCCTTGTAATAAGGTTAACTTGAATTCGATTCAAACCGAATTGAAGGAAAAGTTAACAGAAAAGACATTCTTGGTAGTTTTAGATGATGTTTGGGATAATCAGCAAAATTTGTGGGACAATTTTCTAAAACCTTTTTTGAGTGGAAATAAAGGAAGTAAAATTCTTTTAACTACTCGTATTAAAAATGTTGATTCTGTAGTGTCAACTACAAATCTACATTATAAACTAGATACATTGTCCAACGAAGATTGCTGGTCTTTGTTTTTGAAACATTCATCTATTTCTACTAGTTCTAGACAATATGAAATCTTAGAACAAATTGGTAAAAAAATTGTTGAAAAATGCAAGGGATTACCTTTGGCTGTGAAGACACTTGGGGGTTTATTGCGGAGTAAGGATAAAGTAGAGGATTGGGAGAATTTACTGAGAAGTGAAATTTGGGAGCTAAATGAAGATGAGAGTAAGATTGTTGCTGCATTAAGAGTTAGTTATCACTATCTTCCTTCAAATTTAAAGCGGTGTTTTGTTTATTGCTCGTTATATCCCCAAGATTATCAATTTGACAAAGATGAATTAATCTTGCTGTGGATGGCTGAAGATCTCTTACAACCAATGGAAAAAAACACATTAGAAAATATTGGTTGTGCTTATTTTGAGGAATTAGTTGCAAGATCATTTTTTCAACTTTCTAGTAAAGGTGCTGGCTTATTTGTAATGCATGATCTCATGCATGATTTAGCATCATTTTTTGCTGAAAAATTCTATTTCAGAGTCAGAGAATTAGGAGATCCACAAAAGATTTGCAGCAAAACTCGTCATTTGTCATACATGGTAAATCCCGATGATTCAAGATTTGGAGAGGCCTACAAGGGAGCAATACATATGAGAACGTTTCTAAATTTGAGTTATTGTAAGAAGCTGGAGATGCTTCCTAGCCGTATGCAAGATCTTGTGAACCTGCGCCATCTTGATACCAGAGGATCTAATTCTTTGAAAGAGATGCCGAAGGGAATGAGCAAGTTAAAGCACCTGAACTTCTTAAGTGGTTATATTGTCGGGGAGCAAGTGGAGAATGGGATAAGAGAATTGGGAGCACTTGACAATCTTCATGGCAAACTTTGTATTTCCAAATTACAGAATGTGAAAGACAGCGATGAAGCTTTGGAGGCAAAGATGGATAGCAAGGAGCACATCAGCATTTTAGAATTGAAGTGGCGTAGAGAAGGTGATACTGTTGATGTTGAAACTGCAAGAGATATACTTGAGGAGTTGCAACCTCACAGAAACTTGAAAGAGTTATCAATTGATGGTTATAGGGGTGAAATATTCCCTGATTGGTTAGGCCTTTCTTGCTACTCCAATTTAACCGACTTGAGTATGTATCGTTGTAAGAATTGCCGTCAGCTTCCTTCACTGGGACAGTTACCCTCTCTAAAGGATCTCAGGATTTTTGAATTCGATGGGTTGGAGAGAATTGGTGGTGAGTTTTACAACAACGCTGAATCATCTCATCAGGGCACACCCTTCAGATCTCTTCAAACTCTGGAATTTGCTCATATGCCTCGCTGGCGAGAGTGGCATATTCCTGATGACTTTGATGGATTTCCCAAACTTAAAAGCCTTTCCATAGTCAACTGTCCGGTGTTAAGTGGAGATCTGCCTGCTCACCTTCCAGCTCTGGAGAAACTTAACATTGTTGACAGCGACGAGCTTGCATGTTCACTGCCGAGAGCTCCCAAGCTTCACCAATTACTTGTAATGGGTCCTTTGTATGAGTCTGAGGGGTATAAGCATTTATCGAAACCGCATGAGGTAGTAATTTTAGAAACTTTGCTTACCAAGTCCGTATTGGAGTGCCTGCCCCACATCCAATGTTCGTGTGTCCAACGTTTGACAATCGAGAATCTTTGGCCAGCAATATCAGTTTCAGGAGATAATTTGCCCGATTCATTACAATATCTGCAAATCACTGGGTGTTCAGACTTATTCTCAGGGCCACTGCATTCCAAGTCCCTAACTGAGATACTTGTCCAAGAATGTGATTCACTGACGTTGTTGCCATTGGGGGCCCTTCCAAATCTGAAGACACTCTCTATCATAGATTGCCCAGAAATGGATTGTTTTGGAGAGGAGTGCCTCCCGCCGAGCTTGACAACCCTTCGGATCAGAAGATGCCAAAAACTAGAGAGGTGGATAACTTGGAGGGGTTTGCAGAGTGAAGGCCTTACCCGTCTTTTCCTTGAAGACTGGGATGAAGTTAAGTCGTTCCCGAGAGAGGGTTGCCTTCCTGCTTCCCTCCAGTATCTATCTTTGTCGTACTTTTCAAATCTGGAGACGCTAGACTGCAAGGGCCTTCACCAACTCACCGCCCTCCAAAAATTAAAAATTAAATACTGTAGCAAGCTGGAGAATATCACACAAGAAAACCTGCCTGCCTCCTTATCAAAATTCATCATCAACAGTGAATGTCCATTGAGGAGTAAGCTGGAAGAGATGAACGACCCACGAATTCAATTCGACACAGACTAG	3309	0.4089	MAAKLGGRAYLSSFVDGVLNKLSSLDVNSTPEAKKLADQKLFRRLKASLRATRPVLDDAEQKQIRDQEVNKWLVDLQDALYLADDLLDELSTKAATVPPTPTPTQRDPGNSSSWSHYVDSILEDSDDDEMGVVTSMQDIVDKLESIVEEKDDLDLKQGVAKDLEDMSWRIQSSLLESSDIYGRNNDKEAIIKLLLDETCDDILSVISIEGIGGIGKTTLAQLVYNDARVKEKFAIKAWACVATKFDPVIVTKSIMEDIASPCNKVNLNSIQTELKEKLTEKTFLVVLDDVWDNQQNLWDNFLKPFLSGNKGSKILLTTRIKNVDSVVSTTNLHYKLDTLSNEDCWSLFLKHSSISTSSRQYEILEQIGKKIVEKCKGLPLAVKTLGGLLRSKDKVEDWENLLRSEIWELNEDESKIVAALRVSYHYLPSNLKRCFVYCSLYPQDYQFDKDELILLWMAEDLLQPMEKNTLENIGCAYFEELVARSFFQLSSKGAGLFVMHDLMHDLASFFAEKFYFRVRELGDPQKICSKTRHLSYMVNPDDSRFGEAYKGAIHMRTFLNLSYCKKLEMLPSRMQDLVNLRHLDTRGSNSLKEMPKGMSKLKHLNFLSGYIVGEQVENGIRELGALDNLHGKLCISKLQNVKDSDEALEAKMDSKEHISILELKWRREGDTVDVETARDILEELQPHRNLKELSIDGYRGEIFPDWLGLSCYSNLTDLSMYRCKNCRQLPSLGQLPSLKDLRIFEFDGLERIGGEFYNNAESSHQGTPFRSLQTLEFAHMPRWREWHIPDDFDGFPKLKSLSIVNCPVLSGDLPAHLPALEKLNIVDSDELACSLPRAPKLHQLLVMGPLYESEGYKHLSKPHEVVILETLLTKSVLECLPHIQCSCVQRLTIENLWPAISVSGDNLPDSLQYLQITGCSDLFSGPLHSKSLTEILVQECDSLTLLPLGALPNLKTLSIIDCPEMDCFGEECLPPSLTTLRIRRCQKLERWITWRGLQSEGLTRLFLEDWDEVKSFPREGCLPASLQYLSLSYFSNLETLDCKGLHQLTALQKLKIKYCSKLENITQENLPASLSKFIINSECPLRSKLEEMNDPRIQFDTD	1102

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst2g03402	1102	PANTHER	DISEASE RESISTANCE PROTEIN RP	53	803	IPR044974	GO:0006952
	Arst2g03402	1102	Gene3D	Ribonuclease Inhibitor	971	1084	IPR032675	-
	Arst2g03402	1102	FunFam	Probable disease resistance protein At1g63360	424	509	-	-
	Arst2g03402	1102	PRINTS	Disease resistance protein signature	205	220	-	-
	Arst2g03402	1102	PRINTS	Disease resistance protein signature	949	965	-	-
	Arst2g03402	1102	PRINTS	Disease resistance protein signature	375	389	-	-
	Arst2g03402	1102	PRINTS	Disease resistance protein signature	277	291	-	-
	Arst2g03402	1102	SUPERFAMILY	L domain-like	880	1080	-	-
	Arst2g03402	1102	Pfam	NB-ARC domain	185	424	IPR002182	GO:0043531
	Arst2g03402	1102	Pfam	Rx N-terminal domain	15	96	IPR041118	-
	Arst2g03402	1102	SUPERFAMILY	L domain-like	497	843	-	-
	Arst2g03402	1102	Gene3D	-	338	422	IPR042197	-
	Arst2g03402	1102	Gene3D	-	15	123	-	-
	Arst2g03402	1102	MobiDBLite	consensus disorder prediction	93	113	-	-
	Arst2g03402	1102	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	168	438	IPR027417	-
	Arst2g03402	1102	Gene3D	-	423	508	IPR036388	-
	Arst2g03402	1102	MobiDBLite	consensus disorder prediction	95	113	-	-
	Arst2g03402	1102	Gene3D	-	169	337	IPR027417	-
	Arst2g03402	1102	Gene3D	Ribonuclease Inhibitor	543	848	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst2g03402	Arst-Chr2	91053303	91073220	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst2g03402	175	507	WRKY Transcription Factor Family	AT5G45050	25.145	1.05e-07	54.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst2g03402	-		-	aip:107628003	1270.76