Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03380 ATGGCTTCCGCAGCCTCTCCAAGAATACCCACCGAGACGGTGAAGAACGCCGTGGAGGCTCTCCTGAAGTGGCGAGATTCCAATTCCGAGTCTCACAAACCCAAACTCTTCGACGCCGACGAAGAATTCGTTTACATAGTCGTTACTCTGAAAACCATCCCTCACCAATCCCGCGTTAACCCTTACAAGGTCCCTTTACCCCACTCTCTCCTCTCTCCCTTCAACGAAACTTGCCTCATCATCGACGACAGGTCCAAATCCAAACTCACTAAACAAGAAGCTCAAAAGAAGATCAAGGCCGATAACGTCTCCGTTTCCAAGGTCCTCAGGTTGTCGAAGCTGGCCTCCGATTACCGCCCTTTTGAGGCGAAGCGAAAGCTCTGTGATTCATATGATCTTTTTTTCGCTGATAAGAGAGTGGTGCCTTTGATGCCCAGGCTGTTGGGGAAGAAATTCTTTAAGAAGAAGAAGGTGCCGGTGCAGGTGGACTTGACTAAGAAGAATTGGAAGGAGCAGGTGGATAAGGCGTGTTCGTCGGCGCTTCTGTTTCTTGGAACGGGGACTTGTTGTGTTGTGAAGGTTGCCAAGGTTTCCATGGAGAGCGAGCAGATTGTTGAGAATATGATGGCTGCCATTGAGGGGGTTGTTGAGGTTGTGCCGAAGAAGTGGGCGAATGTGAGGTCCTTGCATGTTAAGCTTTACGAGTCGCTGGCGCTGCCTGTTTTCCAGGCTGTTCCGGAGGTGAAGTTGAGGATTGAGGGAAGTAAGGTTGAGGAGGCGGAGAAAGAGAAGCAGACGATGGAGGAGGAGGAAGAGGGCGAAAACCATAGTGGCGCGAAGGCGGTGAAGAAGAAGAAGGGGAGGATTCATGAAGTTAGATACATGGATAGCGAAGTTGGTGAGGATAATGTTGAAGATGTGGCAGGTAGTGAGGATGATGGTGGTGGTGTTGTTATGGAGGAAGATTTAAAGGATGCTGGAAAAGGTAGTGGAGAATTGGCGAATAAGAAGAGGAAGAAAGGGGCATTGAGTGAGTTGAGCAGTGTCAAAGAATTGAAAAAATCTGTTAAGAGAAGTGGTAAACAGGTTGAGGATGGAGATTCAGGAAAGAAGGGGAAGAATATCAAGAAGAAACTATCTCTATTGAAGTCAGAAGAAGCTGATTTGAAAAAGAAAGTGAGGGCCAAGAAAAGTAAGAAGGCTGCTTAA 1209 0.4789 MASAASPRIPTETVKNAVEALLKWRDSNSESHKPKLFDADEEFVYIVVTLKTIPHQSRVNPYKVPLPHSLLSPFNETCLIIDDRSKSKLTKQEAQKKIKADNVSVSKVLRLSKLASDYRPFEAKRKLCDSYDLFFADKRVVPLMPRLLGKKFFKKKKVPVQVDLTKKNWKEQVDKACSSALLFLGTGTCCVVKVAKVSMESEQIVENMMAAIEGVVEVVPKKWANVRSLHVKLYESLALPVFQAVPEVKLRIEGSKVEEAEKEKQTMEEEEEGENHSGAKAVKKKKGRIHEVRYMDSEVGEDNVEDVAGSEDDGGGVVMEEDLKDAGKGSGELANKKRKKGALSELSSVKELKKSVKRSGKQVEDGDSGKKGKNIKKKLSLLKSEEADLKKKVRAKKSKKAA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03380 402 MobiDBLite consensus disorder prediction 317 379 - -
Arst2g03380 402 CDD Ribosomal_L1 14 241 IPR028364 -
Arst2g03380 402 SUPERFAMILY Ribosomal protein L1 12 242 IPR023674 -
Arst2g03380 402 MobiDBLite consensus disorder prediction 258 379 - -
Arst2g03380 402 FunFam Ribosomal protein L1p/L10e family 87 178 - -
Arst2g03380 402 Pfam Ribosomal protein L1p/L10e family 33 236 IPR028364 -
Arst2g03380 402 Gene3D - 87 179 IPR016095 -
Arst2g03380 402 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 17 236 - -
Arst2g03380 402 Coils Coil 250 277 - -
Arst2g03380 402 MobiDBLite consensus disorder prediction 258 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03380 Arst-Chr2 90876876 90878568 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03380 130 232 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 31.068 1.28e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03380 K14775 - ahf:112697689 651.744