Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03330 ATGACAAATTTGTACACTTGTCTTGATGGTTTCTCACAAAGCAAAAATGGGAATGCTGTGAGAGGGTTGATAGAGGAGAAAGTGATTGAGATATCACATCATGTTAGTAACTCATTGGCAATGTTGAAGAAAGTGAAGACAAGTTTGAAGAAAGAAGAGGTGTTTGCTGAATATGGAACAATGAAGAAAGGGTTCCCTTCATGGGTTTCTGCTAAGGATAGGAAGCTTCTAGAAGATGGAAATGTGAATGAAACTAAGATTGATGTTGTTGTGGCTAAAGATGGTTCTGGAAATTTTACTACTATTGGTGAAGCTGTAGTTATGGCTCCTAATTCCAGCACAACCAGGTTTGTGATATACATAAAAAGTGGAGCATACTTGGAGAATGTGGAAGTAATTAGAAAGAAGAGTAATTTGATGTTTATTGGAGATGGCATTGGAAGGACCATTGTCAAGGCAAGTAGGAATGTTGTCGATGGCTGGACCACTTTTCAATCAGCTACTGTTGGTTTGATAACAGTAAATCATGTCTGA 534 0.3783 MTNLYTCLDGFSQSKNGNAVRGLIEEKVIEISHHVSNSLAMLKKVKTSLKKEEVFAEYGTMKKGFPSWVSAKDRKLLEDGNVNETKIDVVVAKDGSGNFTTIGEAVVMAPNSSTTRFVIYIKSGAYLENVEVIRKKSNLMFIGDGIGRTIVKASRNVVDGWTTFQSATVGLITVNHV 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03330 177 PANTHER PECTINESTERASE 1 170 - -
Arst2g03330 177 SUPERFAMILY Pectin lyase-like 86 171 IPR011050 -
Arst2g03330 177 Pfam Pectinesterase 88 171 IPR000070 GO:0030599|GO:0042545
Arst2g03330 177 Gene3D - 82 176 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03330 Arst-Chr2 90620171 90634336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03330 1 171 Carbohydrate Esterase AT4G02320 52.174 4.20e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03330 K01051 - adu:110278297 348.977