Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03320 ATGATTTTTGCACTGATCTTTTTAGCAACACATCTCAATTATTTCATTGAAGCCCCAAATTTCAAATCAACAACACCACAAGAAGGGAAAAAACATCTCCATTTCCAAAACCATATCCAATTAGTAGCACATTCAAAATGCAAAGGAACACTCTACCCTGATCTCTGTGTCTCAACCTTATCCACATTCCCAAACCTTGAAACAAGAACAATGCCACAAATAATCTCCAAAGTAGTCAACCACACAGTCCATGAAGTCAAATCTTCATCCAACAACTGCACCACCATAATCAAGAATCTCCAAAACACTCTCAACACAATTGAGAAAAGAGCCTTAGATGATTGTCTCAAACTCTTTGATGACACCATAGTAGAACTCAACACCACCATTCTTGATCTCTCAAGAAACCCATCATCATCATCATCATCTTCCAACCAAGATTTGCAAACTCTACTAAGTGGGGCAATGACAAATTTGTACACTTGTCTTGATGGTTTCTCACAAAGCAAAAATGGGAATGCTGTGAGAGGGTTGATAGAGGAGAAAGTGATTGAGATATCACATCATGTTAGTAACTCATTGGCAATGTTGAAGAAAGTGAAGACAAGTTTGAAGAAAGAAGAAGTGTTTGCTGAATATGGAACAATGAAGAAAGGGTTCCCTTCATGGGTTTCTGCTAAGGATAGGAAGCTTCTAGAAGGTGGAAATGTGAATGAAACTAAGATTGATGTTGTTGTGGCTAAAGATGGTTCTGGAAATTTTACTACTATTGGTGAAGCTGTAGCTATGGCTCCTAATTCCAGCACAACCAGGTTTGTGATATACATAAAAAGTGGAGCATACTTGGAGAATGTGGAAGTAATTAGAAAGAAGAGTAATTTGATGTTTATTGGAGATGGCATTGGAAGGACCATTGTCAAGGCGAGTAGGAATGTTGTCGATGGCTGGACCACTTTTCAATCAGCTACTGTTGCTGTGGTAGGAGAAGGCTTCATAGCTAAGGGCATAACCTTTGAGAACTCAGCCGGGCCAGACAAGCACCAAGCCGTGGCGCTACGAAGCGGCGCCGACTTCTCCGCCTTCTACAAATGCAGCTTCGTCGGCTACCAAGACACCCTCTACGTCCACTCCATGCGCCAATTCTACCGCGACTGCGACATTTACGGCACCGTTGACTTCATATTCGGCAACGCCGCCGTACTCTTCCAAAATTGCAACCTCTACGCACGAAAACCTAACGAGAATCAAAAGAATCTTTTCACCGCACAAGGCAGAGAAGATCCGAACCAGAACACCGGAATTTCGATCTTGAATTGCAAGATCGCCGCCGCATCGGACCTAATTCCGGTCAAATCGTCGTTCAAGAGTTACTTAGGGAGGCCATGGAAACTATACTCGAGAACGGTGTACCTTAGATCTTACATGGAGGATCTGATTGATCCGAAAGGGTGGCTTGAATGGAATGAGACATTTGCATTGGACACACTTTATTATGGTGAGTATATGAATAAGGGGCCAGGTTCAAACACAAGTGGTAGAGTAAATTGGCCAGGTTTTAGGGTTATTAATAGTTCCAATGAAGCAAGCCAATTCACTGTTGGTGAGTTCATACAAGGTAGTGAATGGTTGAACAACACTGGCATTCCATTCTTCTATAATTTGAGTTGA 1668 0.4203 MIFALIFLATHLNYFIEAPNFKSTTPQEGKKHLHFQNHIQLVAHSKCKGTLYPDLCVSTLSTFPNLETRTMPQIISKVVNHTVHEVKSSSNNCTTIIKNLQNTLNTIEKRALDDCLKLFDDTIVELNTTILDLSRNPSSSSSSSNQDLQTLLSGAMTNLYTCLDGFSQSKNGNAVRGLIEEKVIEISHHVSNSLAMLKKVKTSLKKEEVFAEYGTMKKGFPSWVSAKDRKLLEGGNVNETKIDVVVAKDGSGNFTTIGEAVAMAPNSSTTRFVIYIKSGAYLENVEVIRKKSNLMFIGDGIGRTIVKASRNVVDGWTTFQSATVAVVGEGFIAKGITFENSAGPDKHQAVALRSGADFSAFYKCSFVGYQDTLYVHSMRQFYRDCDIYGTVDFIFGNAAVLFQNCNLYARKPNENQKNLFTAQGREDPNQNTGISILNCKIAAASDLIPVKSSFKSYLGRPWKLYSRTVYLRSYMEDLIDPKGWLEWNETFALDTLYYGEYMNKGPGSNTSGRVNWPGFRVINSSNEASQFTVGEFIQGSEWLNNTGIPFFYNLS 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03320 555 CDD PMEI-like_3 47 199 - -
Arst2g03320 555 FunFam Pectinesterase 40 201 - -
Arst2g03320 555 NCBIfam pectinesterase inhibitor domain 42 199 IPR006501 GO:0004857
Arst2g03320 555 Pfam Pectinesterase 243 539 IPR000070 GO:0030599|GO:0042545
Arst2g03320 555 Gene3D - 237 554 IPR012334 -
Arst2g03320 555 SUPERFAMILY Pectin lyase-like 241 552 IPR011050 -
Arst2g03320 555 ProSitePatterns Pectinesterase signature 2. 387 396 IPR033131 -
Arst2g03320 555 Pfam Plant invertase/pectin methylesterase inhibitor 45 196 IPR006501 GO:0004857
Arst2g03320 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 201 IPR035513 -
Arst2g03320 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 199 IPR035513 -
Arst2g03320 555 PANTHER PECTINESTERASE 43 544 - -
Arst2g03320 555 SMART PMEI_2 38 196 IPR006501 GO:0004857
Arst2g03320 555 FunFam Pectinesterase 237 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03320 Arst-Chr2 90540848 90548999 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03320 73 554 Carbohydrate Esterase AT4G02320 54.949 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03320 K01051 - gmx:100802881 838.18