LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst2g03316	ATGGCTGCTGAACTTGTTGGAGGAGCTTTTCTCTCTTCTTTTCTCAATGTTCTTTTTGATAGGCTGTCCGATCCTGCGATCATCAACATGATGCGAGGAAAGAAGGTTGACCAGAAGCTGCTTCAAAAGCTGAAGACCATTCTAAACGTGGTTGAAGCTGTGCTGAATGATGCTGAGAAGAAACAGATCACTGACTCTGCTGTCAAGAGGTGGCTCGAAGATCTCCAAGATGCTGTCTATGATGCTGATGACTTGTTGGATGAAGTGGCCACCAAAGCTGCCACTCAGAAGGATCCACCAGGTAACTTCCTGTCTCGCTTTCTCAATTTGCAAGATAGGGAGATGGTTACTAGGATTGAAGACATCATTGCTAGACTAGAAGAGATTGCAAAACACAAAGATATCCTTCGTCTAGAAAAGATTGTAGCCAAGAATATGTCTGGGAGAAACGAATCAACATCTCTTGTTCAAAAGTCTGATGTATTTGTTGGTAGGGACCAAGACAGGGAGGATATAGTCAAATTGTTGTTAGATGATACTGATGATGGTGAACTATCTGTCATCCCCATCTGGGGTATGGGTGGGATCGGAAAAACTACTTTGGCTAAGTTGGTTTTTAATGATGACAAAGTGCAGCAAAAGTTTAATGTTAGAGCATGGGTTTGTGTTGGGGAAGAATTTGATGTTCTTAAAGTGACAAAGACTGTAATAGAGGAAATAACTTCTAGTCGGTGTGATATGAATAGCTTAAACTCAGCTCAACAACATTTAAGGAGTAAGCTAACAGGGATGAAATTCTTGGTTGTTTTGGATGACTTTTGGAGTAACAATTACACAGCTTGGGCAAATTTTCTGATTCCTTTTAGATGTGGAAGTGAGGGGAGTAAGATCCTTGTGACAACTCGTAGCGAAAAGATTGCAAACATGGTGAAAGGTTTTCATTATCAAGCCTACAATTTGAGTGCGTTGAATGATGAAGATTGTTGGATAGTGTTTGCAAATCATGCATTTCTTTCTGGAGAGCGTCTAGCTTTTGAAAAAGTTGCCAGAGAAATTGTTAAAAAGTGCAAGGGATTACCTCTAGCTGCTCAAGCACTTGGGAGCTTATTAAGGTCCAAAGATAATGAAAAGGATTGGAATAATGTTTTGAACAGTGAAATTTGGGAATTTTCTGAAGAGGAAATTGAAATTATTCCTGCGCTGAGGATTAGTTATTACCACCTTCCTTCGCACTTAAAACGTTGTTTTGTTTATTGCTCTTTGTATCCCAAAGACAATGAATTTGATAGAGATGAATTGGTGTTATTGTGGATGGCCGAGGGTCTTTTGCAACAGCCGAGGGGGGGAAGCACTTTAGAAGAAGTTGGCTATGAATATTTTAGTGATTTAGCATCAAGATCTTTTTTTCAACCTTCTAATAATGCTTATAAAACTTCATTTGTAATGCACGATCTCATGCATGATTTAGCAACATTCTATGGTGAAAAGTTCTATTTTAGAACCTTTGAAGTCAAGAATGTACTCAAGCACGATATCAAAACTCGTCATTTGTCGTATGTTTTGCGCAACAAGGATTCAGTCTCAAAGATCCTGGAAGTATGTGATAGTTTAAAGCATGCAAGGACATTGCTGCAAGTCAATTTGAAGTGCTTACGAGAGGGAATAGTCGTTCCTTGTGACTTACTAGAACAATTGAAGTGCTTACGAGTTTTGTCATTTAAAATTTTTTCAGATGATGAAAACTTGTTGCATCGTTCAATTGGTGAATTGATCCATTTGCGTTATTTGGATCTTTCATACACATCCATCGTGACTTTGCCCGAGTCTTTAAGTTGCTTGTACAATTTACAAACCTTGAAGTTGAGAGAGTGTAGAAATCTTAAAAAGCTTCCTAGCAAGATGCAAAATCTTGTGAATTTGCGTCATCTTGATGTTTTTGGCTCTATTTCGGTGGAAGAGATGCCAAAAAAGATGAGCAAATTAAAAGATTTGCAATTTTTAAGTGACTATATTGTGGGGAAACATGAAGAGAATGGGATTGGAGAACTGGGAGGACTAACACATCTTCATGGGACATTGTGGATTACGCAACTAGAGAATGTTAAGAATAGTGGTGAAGCATCGAATGCAAGGATGGATGAAAAAATACACCTGAATGCTTTATATTTGGAGTGGTCATGCTCATCATTTGAAGAAAGTGAGGTTTGTGATTCCCAAACTGAAAAAGATGTACTCGACAAATTACGTCCTCACAAAAACTTGAAGAAGCTATGCATCAGGGGTTACAGAGGTAGCATGTTTCCGGATTGGGTAGGGCAGTCTTCGTACCACAACATGACTGTGTTGCAGCTGAGTGGATGCAGGAATTGTTGGGTGCTTCCTTCACTTGGACAGTTACCCTCTCTGGAGAGGCTCGTTATTAGAGAGTTCGAGAAGGTGAAGAAGATTGGTGGGTCATTCTATAAGGGTGATGGAACTCATCAGCATCAGGAGACACCCTTCCGATCCCTTAAATATCTGAGTATTGAAAAACTGCCTTGCTGGGAGGAATGGGAGTCATATGAATGTGATGATGATGATGATGATGCACCATTTCCTCAACTTGAGACACTTCAGATACACAACTGTCCTAAGTTAAGAGGAGATTTGCCCACTTTCCTTCCGTCTTTGAAATTACTCCGCATTTCAGGATGCGAGGAGATTGGTTGTTATCTGCCAAGAGCTCCCATCCTAAGCGAATTAAGAATATATGGCAAACAGGAAGCAAGAATGCGGGACCAACCACTTTCCATGTTGGAGAAAGTAGATATTAATGGAGAGCAGCTTGTGGATTCTCTGTTTGAGGCCATGACCCACACCCAACCAACCTCTCTCATAGAGCTAGAGATCTCAAAGTGCTCATCAGCCATATCATTTCCAGGGGATTCTTTGCCTCCTTCATTGCAACAGTTGCGGATCAAAAACTGCAAGAATGTAGAATTCCCAATGCAACACCAACAACATCACTCGCTACAGACATTAGAAATCCACAACAGCTGTGATTCGCTTACATCCTTCGCATTGCCAGCGTTCCCAAATCTCAAGTATCTCACAATTGAAAGATGTGAAAATTTGACATCTCTGGAGGTGTCACAGTCAAAGTCCCTCCGATATTTATGGATTGCAGAGTGCCCTAAGCTGAAGAACATAATAAGGCTGCCTGCCTCTTTAAGTGCACTCGACATCAGAGAATGTGGGTTGTTGGGTGAAGGCATAGAGAGGAAGGACCCCCACATTTGGCCATCCATTTCCCACATCCCCAACATTTGTGTTGACGGCACATGGGTGAAGGCATAG	3336	0.4074	MAAELVGGAFLSSFLNVLFDRLSDPAIINMMRGKKVDQKLLQKLKTILNVVEAVLNDAEKKQITDSAVKRWLEDLQDAVYDADDLLDEVATKAATQKDPPGNFLSRFLNLQDREMVTRIEDIIARLEEIAKHKDILRLEKIVAKNMSGRNESTSLVQKSDVFVGRDQDREDIVKLLLDDTDDGELSVIPIWGMGGIGKTTLAKLVFNDDKVQQKFNVRAWVCVGEEFDVLKVTKTVIEEITSSRCDMNSLNSAQQHLRSKLTGMKFLVVLDDFWSNNYTAWANFLIPFRCGSEGSKILVTTRSEKIANMVKGFHYQAYNLSALNDEDCWIVFANHAFLSGERLAFEKVAREIVKKCKGLPLAAQALGSLLRSKDNEKDWNNVLNSEIWEFSEEEIEIIPALRISYYHLPSHLKRCFVYCSLYPKDNEFDRDELVLLWMAEGLLQQPRGGSTLEEVGYEYFSDLASRSFFQPSNNAYKTSFVMHDLMHDLATFYGEKFYFRTFEVKNVLKHDIKTRHLSYVLRNKDSVSKILEVCDSLKHARTLLQVNLKCLREGIVVPCDLLEQLKCLRVLSFKIFSDDENLLHRSIGELIHLRYLDLSYTSIVTLPESLSCLYNLQTLKLRECRNLKKLPSKMQNLVNLRHLDVFGSISVEEMPKKMSKLKDLQFLSDYIVGKHEENGIGELGGLTHLHGTLWITQLENVKNSGEASNARMDEKIHLNALYLEWSCSSFEESEVCDSQTEKDVLDKLRPHKNLKKLCIRGYRGSMFPDWVGQSSYHNMTVLQLSGCRNCWVLPSLGQLPSLERLVIREFEKVKKIGGSFYKGDGTHQHQETPFRSLKYLSIEKLPCWEEWESYECDDDDDDAPFPQLETLQIHNCPKLRGDLPTFLPSLKLLRISGCEEIGCYLPRAPILSELRIYGKQEARMRDQPLSMLEKVDINGEQLVDSLFEAMTHTQPTSLIELEISKCSSAISFPGDSLPPSLQQLRIKNCKNVEFPMQHQQHHSLQTLEIHNSCDSLTSFALPAFPNLKYLTIERCENLTSLEVSQSKSLRYLWIAECPKLKNIIRLPASLSALDIRECGLLGEGIERKDPHIWPSISHIPNICVDGTWVKA	1111

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst2g03316	1111	FunFam	Probable disease resistance protein At1g61300	145	314	-	-
	Arst2g03316	1111	SUPERFAMILY	L domain-like	481	902	-	-
	Arst2g03316	1111	Coils	Coil	41	61	-	-
	Arst2g03316	1111	PRINTS	Disease resistance protein signature	885	901	-	-
	Arst2g03316	1111	PRINTS	Disease resistance protein signature	356	370	-	-
	Arst2g03316	1111	PRINTS	Disease resistance protein signature	260	274	-	-
	Arst2g03316	1111	PRINTS	Disease resistance protein signature	187	202	-	-
	Arst2g03316	1111	FunFam	Probable disease resistance protein At1g63360	405	492	-	-
	Arst2g03316	1111	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	153	419	IPR027417	-
	Arst2g03316	1111	PANTHER	DISEASE RESISTANCE PROTEIN RP	41	876	IPR044974	GO:0006952
	Arst2g03316	1111	Gene3D	Ribonuclease Inhibitor	924	1104	IPR032675	-
	Arst2g03316	1111	Gene3D	-	142	313	IPR027417	-
	Arst2g03316	1111	Gene3D	-	404	491	IPR036388	-
	Arst2g03316	1111	Gene3D	Ribonuclease Inhibitor	522	923	IPR032675	-
	Arst2g03316	1111	Gene3D	-	15	135	-	-
	Arst2g03316	1111	Pfam	Rx N-terminal domain	10	102	IPR041118	-
	Arst2g03316	1111	Gene3D	-	322	403	IPR042197	-
	Arst2g03316	1111	SUPERFAMILY	L domain-like	866	1082	-	-
	Arst2g03316	1111	Pfam	NB-ARC domain	169	387	IPR002182	GO:0043531

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst2g03316	Arst-Chr2	90525750	90539473	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst2g03316	162	382	WRKY Transcription Factor Family	AT4G12020	27.984	2.10e-09	60.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst2g03316	-		-	ahf:112730660	1905.57