Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03312 ATGGATTCATCAGAAATCGAATCCAATTCCAAGTTATATGCCAAAAACGGCATCCTCTTCCTTACCTTCACCGTACTCCTTTTCTTCCTCCTCCTCCTCATCATTTTCCTCCACACTTTCCGACACTCATGCTTTCCTATCCGCCGCCGTAACAGCCACCGTCGTCACCACCGCCACCGACACACTGTTCCCGCCAGCAACGGTATCCACCCTTCCCTTCTTACTACCCTCCCAACCTTCACACACCCTCCTTCTTCTCCTTCCGCCGTCGGCGGCGGCGACAGCTGTGCCGTGTGCATGTCGGAGTTCGTCGCCGGCGAGGAGGGCCGTGTCCTTCCGATTTGCCGCCACGCTTTTCATTCGCAATGCATAGATGCGTGGTTCGGTTCTCACTCGAGTTGCCCGCTTTGTAGGAAACCGGTTCATCCGGTTCAACCCGGTTCGGTGGTTATTGAACCGGGTCTGGAGAAGTGGTTTCCTGAACCGATTTGGTGCCCGAAGAAGAAACCGTTGGAGATGGAGTTGGAAATGGAGAAAGTGCAGAAGATGAAGAATAGTAGTTACTGTATAAATATAATGGGTCTTTAA 588 0.5221 MDSSEIESNSKLYAKNGILFLTFTVLLFFLLLLIIFLHTFRHSCFPIRRRNSHRRHHRHRHTVPASNGIHPSLLTTLPTFTHPPSSPSAVGGGDSCAVCMSEFVAGEEGRVLPICRHAFHSQCIDAWFGSHSSCPLCRKPVHPVQPGSVVIEPGLEKWFPEPIWCPKKKPLEMELEMEKVQKMKNSSYCINIMGL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03312 195 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 18 145 - -
Arst2g03312 195 SUPERFAMILY RING/U-box 92 144 - -
Arst2g03312 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 52 144 IPR013083 -
Arst2g03312 195 SMART ring_2 96 137 IPR001841 -
Arst2g03312 195 CDD RING-H2_EL5-like 95 138 - -
Arst2g03312 195 ProSiteProfiles Zinc finger RING-type profile. 96 138 IPR001841 -
Arst2g03312 195 Pfam Ring finger domain 94 138 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03312 Arst-Chr2 90481887 90482474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03312 16 139 C3H Transcription Factor Family AT1G76410 44.444 9.53e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03312 - - ahf:112728565 336.65