LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst2g03255	ATGGCTGCTGAACTTGTTGGAGGAGCTTTTCTCTCTTCTTTCCTCAGTGTTCTTTTTGACAGGCTGTCTGATCCTGAGATCATCAACATGATGCGAGGAAAGAAGGTTGACCAGAAGCTGCTTCAAAGGCTGGAGAACATTCTGAATGTGGTTGAAGCTGTGCTGAATGATGCTGAGAAGAAACAGATCACTGACCCTGCTGTCAAGAGGTGGCTTGAAAATCTCCAAGATGCTGTCTATGATGCTGATGACTTGCTGGATGAAGTCGCCACCAAAGCTGCCACCCAGAAGGATCCACCAGGTAACTTCCTGTCTCGCTTTCTCAATTTCCAAGATAGGGAGATGGTTACTAGGATTGAAGAAATCATTGCTAGACTAGAAGATATTGCAAAACACAAAGATATCCTTCGTCTAGAAAAGATTGCAGCCAAGAACATGTCCGGGAGGATTCCATCAACCTCTTTGGTTAAAAAATCTGATATATTTGTTGGCAGGGACAAAGAGAGGGATACCATAGTGAAATTGTTGTTAGATGATAGTAACAATGGTGAACTGTCTGTGATTCCCATCGTGGGCATGGGTGGGATAGGAAAAACTACCTTGGCTAAATTGGTTTATAATAATGAAAAAGTGCAGCAAAAATTTCATGTCAAGGCTTGGGTTTGTGTTGGGGAGGAATTTGATGTTCTTATGGTGACAAAGGCCGTGATAGAGAAAACTTGTAGTCCTTGTAACTCAAATGATTTAGATACGGTTCAAAATCATTTGAAGAATGCGCTAGTGGGGAAGAACTTCTTGGTTGTTCTGGATGATGTATGGAGCAGTAATTGTGAGGGTTGGGAAAGTTTTCTAATTCCTTTTGAATGTGGAAGTGAAGGAGGGAAGATTCTTGTGACAAGCCGTCTTGATACAGTTGCTTCTATGGTGAAAACTAAACATAATGAAGCTCACAATTTGAGTCTGTTGGATGAAGAAGAGTGCTGGTTAGTGTTTGCAAATCGTGCATGGGACCCTGCTGAGTCCCGAGACTGTTCAGATTTAGTAGAAATTGGTAGAAAAATTGTAGAAAAATGTAAAGGATTACCTTTGGCAGCTCAAACCCTTGGAGGGTTATTGCGAGGGGAAGATAGTGAAAATGTTTGGAATGATGTTTTAAATAGTGAAATTTGGGAATTTTCTGAGGAGAAATGCGGGGTTCTTCCAGCATTGAGGATTAGTTATTACCACCTTCCTTCACATTTAAAACGTTGTTTTGTTTATTGTTCTTTGTATCCGAAGGACTTTGAATTTGATAGACATAATTTGATGCTATTGTGGATGGCAGAGGGTCTTTTGCAGCTACCAAAAAGTGGAAGCACTTTAGAAGAAGTTGGTTATGGATATTTTGATGATTTGGTTTTGAGATCCTTTTTTCAACATGCTAACTCTAATGAAAATTCATTTGTGATGCATGATCTCATGCATGATTTAGCAACATTCTATGGTGGAAAGTTCTTTTCTGGAGCCTTCGGACTCAAGAATGCGGCCAAACATGATGCCAAAACTCGTCATTTGTCATATGATCTGATCGACGAGGATTCAATCCCAAAGATATGGGAAGCATGTAGTAGTTTAAAACATGCAAGGACATTGTTGAAAACCAGTTTGATTGCATATGAAACATTCCCAGATGAAAGAGTTGATTCTAGTCACTTACTAGAACAATTAAAGTGCTTGCGAGTTTTGTCATTTAAATTCTTTTGTTATGAGGAAGACTTGTTACATGATTCAATTGGTGAATTGATCCATTTGCGTTATTTGGATCTCTCTGGCCAACCAGTCATGATGTTGCCTGAATCATTGAGTAATTTGTACAATTTACAAACGTTGAAGTTGAGAGATTGCAGTAACCTTAAAAAACTTCCCACCAACATGCAAGATCTTGTAAATTTGCGCCATCTTGATATTCATGGCACTGATTTGGAAGATATGCCAAAGGGGATGAACAAGTTAAAAGATTTGCAGTTTTTAAGTGACTATGTTGTGGGGAAGCATGAAGAGAATGGGATTGGAGAATTGGGAGAGCTAGCAAATCTTCATGGGACATTTTATGTCCAGAAATTAGAGAATGTAATCAGTAGTGTTGCAGCCTCGAATGCAAGGATGGATGAGAAGATACATCTCAATGATTTATCTTTGAAGTGGTCATCAGGTGAAGATAGTGATATTGATGATTCCCAAGTTGAAAAGGATGTACTTGACAAATTAAGGCCTCACAAAGGCCTAAAAAAGCTAAAGATCGAGGGGTTCAGGGGTACGATGCTTCCGGATTGGGTAGCGCACTCTTTCTACAACAACATGACTTTCTTGGAGCTGAGGGGATGCAAGACTTGTTGGATGGTTCCTTCTCTTGGACAGTTACCCTCTCTAATGGAATTGAGGCTTGATGGATTTGATATGGTGAAGATCATTGGTGCTGAGTTTTATAAGAGTGACAGAAGTCATCATCATCATCATCATCAGACACCCTTTAGATCCCTTAAAGCTCTGTTTATTTCTCATATGCGTTGGTGGGAGGAATGGGAGTCATTTGAATGTGATGATGCACCATTTCCTCAACTTAAGCAACTTAGCATATGGGAGTGTCCTAAGTTAAGAGGTGATTTGCCTGCTTTCCTTCCGTCTTTGAAATCACTATACATTGAAGACTGTGAGCAGCTTGGTTGTTATCTGCCAAGAGCTTCCATCATAAGGGAACTAAGAATATATGGCAAACAGGAAGCAAGAATGCAGGACCTACCACTTTCACTGCAACAACTATCAATTGAAGGAAACCAGCTTGTGGAGTCTGTTTTTGGGGCCATGACCCGAACCCAACCAACCTCTATCACAGGGTTATGGATCTCAAACTGCTCATCAGCCATATCATTTCCAGGGAATTCTTTGCCTCCTTCATTGAAAGAGTTGGGGATCATGAATTGCAAGAATATGGAGTTCCCAATGCAACAACAGCATCATCATGAGTCACTAGTTAAATTAACAATAGAAAACAGTTGTGTTTCACTTACATCCATGGTGTTGGAAGCTTTCCCAAATCTGACATCTATCACAATCAAACGATGTGAAAATTTGAGATCTCTTGAGGTGGTGCCACAGTCGCAGTCCCTCGAAGGATTATCAATTGAAGGCTGCCCTAAGATGGAGAACATAGCAGGGGAAAGGCTTCCTGCCTCTTTAAGGTTTCTCTTCATCAGTGAATGTCCATTGTTGGGTGAAAGCATAAAGAGGAAGGACCTCTGCATTTGGCCTACTATTTCCCACCTCAACCACATTTGTGTTGATGGGAGACGGATTTCATGA	3339	0.4046	MAAELVGGAFLSSFLSVLFDRLSDPEIINMMRGKKVDQKLLQRLENILNVVEAVLNDAEKKQITDPAVKRWLENLQDAVYDADDLLDEVATKAATQKDPPGNFLSRFLNFQDREMVTRIEEIIARLEDIAKHKDILRLEKIAAKNMSGRIPSTSLVKKSDIFVGRDKERDTIVKLLLDDSNNGELSVIPIVGMGGIGKTTLAKLVYNNEKVQQKFHVKAWVCVGEEFDVLMVTKAVIEKTCSPCNSNDLDTVQNHLKNALVGKNFLVVLDDVWSSNCEGWESFLIPFECGSEGGKILVTSRLDTVASMVKTKHNEAHNLSLLDEEECWLVFANRAWDPAESRDCSDLVEIGRKIVEKCKGLPLAAQTLGGLLRGEDSENVWNDVLNSEIWEFSEEKCGVLPALRISYYHLPSHLKRCFVYCSLYPKDFEFDRHNLMLLWMAEGLLQLPKSGSTLEEVGYGYFDDLVLRSFFQHANSNENSFVMHDLMHDLATFYGGKFFSGAFGLKNAAKHDAKTRHLSYDLIDEDSIPKIWEACSSLKHARTLLKTSLIAYETFPDERVDSSHLLEQLKCLRVLSFKFFCYEEDLLHDSIGELIHLRYLDLSGQPVMMLPESLSNLYNLQTLKLRDCSNLKKLPTNMQDLVNLRHLDIHGTDLEDMPKGMNKLKDLQFLSDYVVGKHEENGIGELGELANLHGTFYVQKLENVISSVAASNARMDEKIHLNDLSLKWSSGEDSDIDDSQVEKDVLDKLRPHKGLKKLKIEGFRGTMLPDWVAHSFYNNMTFLELRGCKTCWMVPSLGQLPSLMELRLDGFDMVKIIGAEFYKSDRSHHHHHHQTPFRSLKALFISHMRWWEEWESFECDDAPFPQLKQLSIWECPKLRGDLPAFLPSLKSLYIEDCEQLGCYLPRASIIRELRIYGKQEARMQDLPLSLQQLSIEGNQLVESVFGAMTRTQPTSITGLWISNCSSAISFPGNSLPPSLKELGIMNCKNMEFPMQQQHHHESLVKLTIENSCVSLTSMVLEAFPNLTSITIKRCENLRSLEVVPQSQSLEGLSIEGCPKMENIAGERLPASLRFLFISECPLLGESIKRKDLCIWPTISHLNHICVDGRRIS	1112

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst2g03255	1112	Gene3D	Ribonuclease Inhibitor	517	916	IPR032675	-
	Arst2g03255	1112	Gene3D	-	406	492	IPR036388	-
	Arst2g03255	1112	Pfam	NB-ARC domain	169	386	IPR002182	GO:0043531
	Arst2g03255	1112	SUPERFAMILY	RNI-like	837	1108	-	-
	Arst2g03255	1112	Coils	Coil	41	61	-	-
	Arst2g03255	1112	SUPERFAMILY	L domain-like	482	903	-	-
	Arst2g03255	1112	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	151	421	IPR027417	-
	Arst2g03255	1112	Gene3D	-	140	317	IPR027417	-
	Arst2g03255	1112	Gene3D	-	321	405	IPR042197	-
	Arst2g03255	1112	Gene3D	-	14	130	-	-
	Arst2g03255	1112	Gene3D	Ribonuclease Inhibitor	924	1103	IPR032675	-
	Arst2g03255	1112	PRINTS	Disease resistance protein signature	615	631	-	-
	Arst2g03255	1112	PRINTS	Disease resistance protein signature	358	372	-	-
	Arst2g03255	1112	PRINTS	Disease resistance protein signature	259	273	-	-
	Arst2g03255	1112	PRINTS	Disease resistance protein signature	187	202	-	-
	Arst2g03255	1112	PANTHER	DISEASE RESISTANCE PROTEIN RP	52	897	IPR044974	GO:0006952
	Arst2g03255	1112	Pfam	Rx N-terminal domain	10	102	IPR041118	-
	Arst2g03255	1112	FunFam	Probable disease resistance protein At1g61300	146	314	-	-
	Arst2g03255	1112	FunFam	Probable disease resistance protein At1g63360	407	493	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst2g03255	Arst-Chr2	90201253	90207561	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst2g03255	184	658	WRKY Transcription Factor Family	AT5G45050	23.381	1.38e-09	60.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst2g03255	-		-	aip:107626153	2137.07