LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst2g03253	ATGGCTGCTGAACTTGTTGGAGGAGCTTTTCTCTCTTCATTTCTCAATGTTCTTTTTGACAGGCTGTCTGATCCTGAGATCATCAACATGATGCGAGGAAAGAAGGTTGACCAGAAGCTGCTTCAAAGGCTGGAGAACATTCTGAATGTGGTTGAAGCTGTGCTGAATGATGCTGAGAAGAAACAGATCACTGACCCTGCTGTCAAGAGGTGGCTCGAAGATCTCCAAGATGCTGTCTATGATGCTGATGACTTGTTGGATGAAGTCGCTACCAAAGCTGCCACTCAGAAGGATCCACCAGGTAACTTCCTGTCTCGCTTTCTCAGTTTGCAAGATAGGGAGATGGTTACTAGGATTGAAGAAATCATTGCTAGACTAGAAGATATTGCAAAACACAAAGATATCCTTCGTCTAGAAAAGATTGCAGTCAAGAACATGTCAGGGAGAATTGAATCAACATCTCTTGTTCAAAAGTCTGATTTATTTGTTGGTAGGGACCAAGACAGGGAGGATATAGTCAAATTGTTGTTAGATGATACTAATGATGGTGAACTATCTGTCATCCCCATCTGGGGTATGGGTGGGATCGGAAAAACTACTTTGGCTAAGTTGGTTTTTAATGACGATAGAGTGCAGCGAAAATTTAATATCAATGCATGGGTTTGTGTTGGGGAAGAATTTGATGTTCTTAAAGTGACAAAGACTGTAATAGAGGAAATAACTTCTAGTCCCTGTGATATGAATAGCTTAAACTCAGCTCAACAACATTTAAGGAGTAAGCTAACAGGGATGAAATTCTTGGTTGTTTTGGATGACTTGTGGAGTAACAATTACACAGCTTGGGCAAATTTTTTGATTCCTTTTAGATGTGGAAGTGAGGGGAGTAAGATCCTTGTGACAACTCGTAGCGAAAAGATTGCAAACATGGTGAAAGGTTTTCATTATCAAGCCTACAATTTGAGTGCGTTGAATGATGAAGATTGTTGGGTAGTGTTTGCAAATCATGCATTTCTTTCTGGAGAGCGTCTAGCTTTTGAAAAAGTTGCCAGAGAAATTGTTAAAAAGTGCAAGGGATTACCTCTAGCTGCTCAAGCACTTGGGAGCTTATTAAGGTCCAAAGATAATGAAAAGGATTGGAATAATGTTTTGAACAGTGAAATTTGGGAATTTTCTGAAGAGGAAATTGAAATTATTCCTGCGCTGAGGATTAGTTATTACCACCTTCCTTCGCACTTAAAACGTTGTTTTGTTTATTGTTCTTTGTATCCCAAAGACTATGAATTTGATAGAGATGAATTGGTGTTATTGTGGATGGCCGAGGGTCTTTTGCAACGGCCGAGGGGGAGAAGCACTTTAGAAGAAGTTGGCTATGAATATTTTAGTGATTTAGCATCAAGATCATTTTTTCAACCTTCTAATAATGCTTATAATACTGCATTTGTAATGCACGATCTCATGCATGATTTAGCAACGTTCTATGGTGGAAAGTTCTTTTCTAGAACCTTTGAAGTCAAGAATGCAGCAAAGCATGATGTCAAAACTCGCCACTTGTCATGTGCTCGCAAGAATGATGATGATTCGTTTATGAAGATCATGGAAGCATGCAAAAGGTTAAAACATGTGAGGACATTGTTGCAACTCAATTTTCGTAAGGATGGTGGAATCCCAGAGGGAGATAGTGTAGCCGTTCCTTCTGACTTACTAGAACAATTGAAGTGCTTACGAGTTTTGTCATTTAAATTTTTTCCAGATGATGAAAACTTGTTGCATCATTCGATTGGGGAATTGATCCATTTGCGTTATTTGGATCTTTCAGACACATCCATCGTGACTTTGCCTGAGTCGTTAAGTTGCTTGTACAATTTACAAACCTTGAAGTTGACATACTGTAAAAAGCTTAAAAAGCTTCCTAGCAAGATGCAAAATCTTGTGAATTTGCGTCATCTTGATGTTTCTGAAACTGGTTTGGAAGAGATGCCAAAAAAGATGAGCGAATTAAAAGATTTGCAATTTTTAAGTTCTTACATCGTGGGCAAGCATGAAGAGAATGGAGTTGGGGAATTGGGAGAACTAGCACATCTTCATGGGTCATTGTGGATTGAGAAATTGGAGAATGTTAAGAATAGTGGTGAAGCATCGAATGCAAGGATGGATGAAAAAATACACCTGAATACTTTATATTTGTGGTGGTCAACGTTTGAAGAAAGTGAGGTTTGTGATTCCCAAAGTGAAAAAGATGTACTTGACAAATTACGTCCTCACAAAGACTTGAAGAAGCTATCCATCAGTTATTACAGAGGTACGATGTTTCCGGATTGGGTAGGGCAGTCTTCGTACCACAACATGACTTGGTTGGAGCTGAGGGGATGCAGGAATTGTTGGGTGCTTCCTTCACTTGGACAGTTACCCTCTCTGAAGAGGCTGCTCATTTCAGGGCTCGACAAGCTGAAGAAGATTGGTGGGTCATTCTATAAGGGTGATGGAACTCATCAGCATCAGGAGACACCCTTCCGATCCCTTAAATTTTTCATTATTCAAAGAATGCCTTGGTGGGAGGAATGGGAGTCATATGAATGTGATGATGATAAGGATGCACCATTTCCTCAACTTGACGAACTTCATATATTGCAGTGTCCTAAGTTAAGAGGAGATTTGCCCACTTTCCTTCCGTCTTTGAAATCACTATTCATTTATGAATGCAAGGAGCTTGGTTGTTATCTGCCAAGAGCTCCCATCCTACGCAAATTAATAATAAGGGACAAACAGGAAGCAAGAATGCGGGAGCTACCACTTTCCATGTTGGAGACACTAGTAATTAATGGAGAGCAGCTTGTGGATTCTCTGTTTGAGGCCATGACCCACACCCAACCAACCTCTCTCATAGAGCTAGACATCTCAGAGTGCTCATCAGCCATATCATTTCCAGAGGATTCTTTGCCCCCTTCATTGGAATATCTAGGCATCTTCAATTGCAAGAATGTAGAATTCCCAATGCACCACCAACAACATCACTCGCTACAGAGATTAGAATTTGTCAACAGCTGTGATTCGCTTACATCCTTCGCATTGCCAGCGTTCCCAAATCTCAAGTATCTCAGAATCGCAAGACGTGAAAAGTTGACATCGCTGGAGGTGTCACAGTCCCTCCGAGAATTATCAATTTCAGACTGCCCTAAGCTGGAGAACATAATAAGGCTGCCTGCCTGTTTATGGGAACTCAAAATCAGAGAATGTGGGTTGTTGGGTGAAGGCATAGAGAGGAAGGACCCCCACATTTGGCCATCCATTTCCCACATCCCCGTAATATTTGTTGATGAGAAACTGATTCAATATCACCCAACATCTTAA	3348	0.4062	MAAELVGGAFLSSFLNVLFDRLSDPEIINMMRGKKVDQKLLQRLENILNVVEAVLNDAEKKQITDPAVKRWLEDLQDAVYDADDLLDEVATKAATQKDPPGNFLSRFLSLQDREMVTRIEEIIARLEDIAKHKDILRLEKIAVKNMSGRIESTSLVQKSDLFVGRDQDREDIVKLLLDDTNDGELSVIPIWGMGGIGKTTLAKLVFNDDRVQRKFNINAWVCVGEEFDVLKVTKTVIEEITSSPCDMNSLNSAQQHLRSKLTGMKFLVVLDDLWSNNYTAWANFLIPFRCGSEGSKILVTTRSEKIANMVKGFHYQAYNLSALNDEDCWVVFANHAFLSGERLAFEKVAREIVKKCKGLPLAAQALGSLLRSKDNEKDWNNVLNSEIWEFSEEEIEIIPALRISYYHLPSHLKRCFVYCSLYPKDYEFDRDELVLLWMAEGLLQRPRGRSTLEEVGYEYFSDLASRSFFQPSNNAYNTAFVMHDLMHDLATFYGGKFFSRTFEVKNAAKHDVKTRHLSCARKNDDDSFMKIMEACKRLKHVRTLLQLNFRKDGGIPEGDSVAVPSDLLEQLKCLRVLSFKFFPDDENLLHHSIGELIHLRYLDLSDTSIVTLPESLSCLYNLQTLKLTYCKKLKKLPSKMQNLVNLRHLDVSETGLEEMPKKMSELKDLQFLSSYIVGKHEENGVGELGELAHLHGSLWIEKLENVKNSGEASNARMDEKIHLNTLYLWWSTFEESEVCDSQSEKDVLDKLRPHKDLKKLSISYYRGTMFPDWVGQSSYHNMTWLELRGCRNCWVLPSLGQLPSLKRLLISGLDKLKKIGGSFYKGDGTHQHQETPFRSLKFFIIQRMPWWEEWESYECDDDKDAPFPQLDELHILQCPKLRGDLPTFLPSLKSLFIYECKELGCYLPRAPILRKLIIRDKQEARMRELPLSMLETLVINGEQLVDSLFEAMTHTQPTSLIELDISECSSAISFPEDSLPPSLEYLGIFNCKNVEFPMHHQQHHSLQRLEFVNSCDSLTSFALPAFPNLKYLRIARREKLTSLEVSQSLRELSISDCPKLENIIRLPACLWELKIRECGLLGEGIERKDPHIWPSISHIPVIFVDEKLIQYHPTS	1115

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst2g03253	1115	Gene3D	-	16	130	-	-
	Arst2g03253	1115	Gene3D	-	322	403	IPR042197	-
	Arst2g03253	1115	Coils	Coil	41	61	-	-
	Arst2g03253	1115	Gene3D	-	142	313	IPR027417	-
	Arst2g03253	1115	PANTHER	DISEASE RESISTANCE PROTEIN RP	53	982	IPR044974	GO:0006952
	Arst2g03253	1115	Gene3D	Ribonuclease Inhibitor	523	895	IPR032675	-
	Arst2g03253	1115	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	152	419	IPR027417	-
	Arst2g03253	1115	FunFam	Probable disease resistance protein At1g63360	405	492	-	-
	Arst2g03253	1115	FunFam	Probable disease resistance protein At1g61300	145	314	-	-
	Arst2g03253	1115	SUPERFAMILY	RNI-like	868	1084	-	-
	Arst2g03253	1115	Pfam	NB-ARC domain	169	387	IPR002182	GO:0043531
	Arst2g03253	1115	Gene3D	-	404	491	IPR036388	-
	Arst2g03253	1115	Pfam	Rx N-terminal domain	10	102	IPR041118	-
	Arst2g03253	1115	SUPERFAMILY	L domain-like	481	903	-	-
	Arst2g03253	1115	Gene3D	Ribonuclease Inhibitor	906	1088	IPR032675	-
	Arst2g03253	1115	PRINTS	Disease resistance protein signature	356	370	-	-
	Arst2g03253	1115	PRINTS	Disease resistance protein signature	617	633	-	-
	Arst2g03253	1115	PRINTS	Disease resistance protein signature	187	202	-	-
	Arst2g03253	1115	PRINTS	Disease resistance protein signature	260	274	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst2g03253	Arst-Chr2	90181341	90186103	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst2g03253	162	382	WRKY Transcription Factor Family	AT4G12020	27.160	6.72e-09	58.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst2g03253	-		-	ahf:112730660	1835.46