Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03237 ATGAAGTTCTGCAAAACCTACCAAAAGTACATGCAAGGGCAAGAGGAGAAGCTACCTGGACTTGAATTCAAAAATCACAAAAAGATTATGAAGAAATGTAGAAGTGGAGGTTGTTATTCTCCTATCATGATGAACCATAATAATAATAATAATAATGCCACCAAAAGTTGCCCTATTCAATGCCCAGTTTGTGATGGAACTTTCTTCCCTTCTCTGCTGAATGAAGTATCAGAAGTAGTAGGGTGCTTCAACAAGCGTGCACAACATTTGCTAGAGTTACACCTCTCTTCAAATTCTGGCTTCAAGAAGTACCTTCTTTGCTTGACAAGATCCAATCATAATACTATCATTCAACAAGGCAAAGATCTTGTCACTTATGCACTCATCAATGCTGTCGCTATCCGAAAAATACTAAAGAAATATGATAAGATACATGATTCAAAGCAAGGGCAATTATTCAAGTCACAAGTGCAGGCTATGCACAAGGAAATTCTTCAGAGTCCATGGCTTATTGAGGTTATGGCCTTATACATCAACACTAACACTAAAGACCCTACATCTTCTTTGTTTGATGGATGCTGCCTCACTTTTAAGGATGGAAAACCATCACTCACTTGTGAAATCTTTAAACCCTACAAAGTTGATATTGACTTGACTTGTTCTATATGCTTGGATACAGTGTTTGATCCTGTGGCGTTGACTTGTGGCCATGTTTTCTGTTACACATGTGCTTGCTCAGCTGCATCAGTAACCATTGTTGATGGACTTAAGGCAGCAGATCCTAAAGAAAAGTGTCCTCTATGCCGCGAGAAAGGAGTTCATGAAGGTGCTGTGCACTTGGAAGAACTAAATATTTTGTTAGGCCAAAGATGCAAGGAATATTGGGAGGAAAGACTTAGAATGGAGAGGGTAGAAAGGGTTAGGCAGGCCAAGGAGCACTGGGAATCTGTCTGTAGGACAGTCATGGGAATCTAA 975 0.3979 MKFCKTYQKYMQGQEEKLPGLEFKNHKKIMKKCRSGGCYSPIMMNHNNNNNNATKSCPIQCPVCDGTFFPSLLNEVSEVVGCFNKRAQHLLELHLSSNSGFKKYLLCLTRSNHNTIIQQGKDLVTYALINAVAIRKILKKYDKIHDSKQGQLFKSQVQAMHKEILQSPWLIEVMALYINTNTKDPTSSLFDGCCLTFKDGKPSLTCEIFKPYKVDIDLTCSICLDTVFDPVALTCGHVFCYTCACSAASVTIVDGLKAADPKEKCPLCREKGVHEGAVHLEELNILLGQRCKEYWEERLRMERVERVRQAKEHWESVCRTVMGI 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03237 324 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 324 IPR033326 -
Arst2g03237 324 ProSitePatterns Zinc finger RING-type signature. 235 244 IPR017907 -
Arst2g03237 324 ProSiteProfiles Zinc finger RING-type profile. 220 269 IPR001841 -
Arst2g03237 324 SUPERFAMILY RING/U-box 213 271 - -
Arst2g03237 324 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 207 322 IPR013083 -
Arst2g03237 324 CDD RING-HC_BAH1-like 213 283 - -
Arst2g03237 324 ProSiteProfiles SPX domain profile. 1 155 IPR004331 -
Arst2g03237 324 Pfam Zinc finger, C3HC4 type (RING finger) 217 271 - -
Arst2g03237 324 SMART ring_2 220 268 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03237 Arst-Chr2 90063711 90066786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03237 217 269 C3H Transcription Factor Family AT4G28270 41.379 9.43e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03237 K16275 - gmx:100787904 462.225