Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03235 ATGCCTCCTCCATTTGATATGATTTCTAAGATGCATCCTCCTAGAGAGGCTTGGAGGCTGAAAGTTAGGGTTCTTAGGCTTTGGGTTGTACCCTCTTTTGGTAACCATGAGGTTCCTAACTCAATGGAGATGATTCTCCTTGATGATAATCTGATTTTGTTCTTTTGTTGGATTTTCAATGTGAAAAAAATTCAAGCTACAGTTAAGAAACCACTCCTTAATAGGTTTAGGGATCATATAGTTGAAGCTACAGTCAAGAAACCACTGCTTAATAGGTTTAGGGATCATATAGTTGAAGGACAAGTTTATAGAATGGCATATTTTACTGTTGTCTCAAATCATGGTAGTTATAGAGCAACTTCTCATGAATTCAAATTGGTTTTCCTTCACCGAACCACTGTTGTAGCTGTTGATGAAGATGTAATCCCTAAGACTTGTTTCAACATTGTTACAGTGCGATGTGCATTGTTTGGGGATTATGTTAATCAAGTGAATAATTTTCTTGCCTCTGGCTATGTGGAGCAGCCTGTTGTGGTGATTCAGCTTGCAAAAGTCAAGTTCTTTAGGGGTCAAGTAGGTCTTCAAAATGTGATGTATGCCACTCAAATATTATTTAATCCTAATATTCCTGAAGTTGTTGAATTCAGCCAGAGTATGATTGAGCAAGGTGTAAATGGTACCCATCCTCTGTTTATTGCAAATGAGGGTAAAGTTCTCTCATTGGAAGATGATTTCATGCGTTTAACTAGGAAATGCACTATTGAAGAGCTTCAAGATAACAATCAGGAGGGTTCTTTTATCATCTTTGGTGCAATTCAAGGTATTGTTGAGGATGGAGGTTGCTGGTATTCTGCGTGTGTGTGTGGAAAGGGTATCTATCCTCAAAATGGTGCATATTACTGTGATTTTTGTTTGAAGCACATAACTAATGTGACTCCAAGATTTAAAATTAAAATAATAGTTGAAGATCGTACTGGTGAGGGTATTTTCCTTCTCTTTGATCGTGAGGCATCTTATTTGCTTAAGAAGTCATGTGCTGACTTGTTTACTGAGGTTCAAAGAGATGCAAGTCTTATATGTGGGGATACTTATCCTCCCATATTTCAAGTGCTCATTGGAAAGAAGTTGCTTCTCAAGGTTGATACCAAAGGTGTCCCACAGGATACATTTTATGGGACTTTCCGAGTTAGGAGAATTTGTGATGATTCAACTATTATTGCGATGTTTGAACTTCCCGATTATGATGCTGATGACGAGTGTACTCCAAAAAAGGAGAATGATTTGCACAAATCTGTTCCTTGTGGAAAAGGGGATGTTGGTATTAAGAAGGAGTTTTCAGATACTTTTATCAAGAGTGAGAAAGATGCTGGTGAGTGTCCTGGGATTTTGTGTAAATCCCCGATTCTTATTGATTTTTTAGCTGGAAAACAGCCTGCTGTTTCTGGAGTGACTGAGTTTGTTGCCTTAAGTGATGGTGAACATAGAAAAGATGAGAAAACACCCAGCAATAATGCTGTTAGTGATGATCTTTCTGCTGAACTCGATATATTGCTTAGCTCAGTGGAAAAAGAAACTCAGGAGGTGTTGTCCCATGTTGTTGATTCATCTTCGCAATATGGAGAGAAGCCATGTTCTTGA 1638 0.3816 MPPPFDMISKMHPPREAWRLKVRVLRLWVVPSFGNHEVPNSMEMILLDDNLILFFCWIFNVKKIQATVKKPLLNRFRDHIVEATVKKPLLNRFRDHIVEGQVYRMAYFTVVSNHGSYRATSHEFKLVFLHRTTVVAVDEDVIPKTCFNIVTVRCALFGDYVNQVNNFLASGYVEQPVVVIQLAKVKFFRGQVGLQNVMYATQILFNPNIPEVVEFSQSMIEQGVNGTHPLFIANEGKVLSLEDDFMRLTRKCTIEELQDNNQEGSFIIFGAIQGIVEDGGCWYSACVCGKGIYPQNGAYYCDFCLKHITNVTPRFKIKIIVEDRTGEGIFLLFDREASYLLKKSCADLFTEVQRDASLICGDTYPPIFQVLIGKKLLLKVDTKGVPQDTFYGTFRVRRICDDSTIIAMFELPDYDADDECTPKKENDLHKSVPCGKGDVGIKKEFSDTFIKSEKDAGECPGILCKSPILIDFLAGKQPAVSGVTEFVALSDGEHRKDEKTPSNNAVSDDLSAELDILLSSVEKETQEVLSHVVDSSSQYGEKPCS 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03235 545 Pfam Domain of unknown function DUF223 81 138 IPR003871 -
Arst2g03235 545 CDD RPA1_DBD_C 254 397 IPR047192 -
Arst2g03235 545 Gene3D - 84 133 IPR012340 -
Arst2g03235 545 Gene3D - 5 83 IPR012340 -
Arst2g03235 545 CDD RPA1_DBD_A_like 19 134 - -
Arst2g03235 545 Gene3D - 134 227 IPR012340 -
Arst2g03235 545 Gene3D - 243 407 IPR012340 -
Arst2g03235 545 SUPERFAMILY Nucleic acid-binding proteins 151 219 IPR012340 -
Arst2g03235 545 SUPERFAMILY Nucleic acid-binding proteins 251 402 IPR012340 -
Arst2g03235 545 CDD RPA1_DBD_B_like 151 220 - -
Arst2g03235 545 SUPERFAMILY Nucleic acid-binding proteins 4 139 IPR012340 -
Arst2g03235 545 Pfam Replication factor-A C terminal domain 270 354 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03235 Arst-Chr2 90043040 90045872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03235 138 348 Core DNA Replication Machinery Family AT5G08020 26.201 5.13e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03235 - - ahf:112744598 803.127