Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03214 ATGAGTGATAACATAGTCTCATCAACACAAACCTTTAATATTAAGTACAACAATACTATCACATTTTCTTCAACAAGTGGAATCTCTTCTTCTTCTTCTCATCATCATAATCATCAAGATTATGGGGTTATCAAAGAGCAAGATCGGTTGCTTCCAATTGCAAATGTTGGGAGAATCATGAAGCAAATCCTTCCAACAAATGCAAAGATCTCAAAGGAAGCAAAGGAGACTATGCAAGAGTGTGTTTCTGAGTTCATAAGCTTTGTGACTGGTGAAGCTTCTGACAAGTGTCACAAGGAGAAGCGCAAGACCGTTAATGGTGATGATATTTGTTGGGCCTTGGCTACTCTAGGGTTTGATGATTATGCTGAGCCACTCAAAAGGTACTTGCATAAGTTTAGGGAATTGGAATGTGAAAAAGCTAATAATCAAAATCATAATAAGGTTATTAATACTACTAATAGAAATAATAATAATCTTATTGAAAAATATAATAGTTATGGGGGTGATGATGATGAAGACTAG 525 0.3505 MSDNIVSSTQTFNIKYNNTITFSSTSGISSSSSHHHNHQDYGVIKEQDRLLPIANVGRIMKQILPTNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYAEPLKRYLHKFRELECEKANNQNHNKVINTTNRNNNNLIEKYNSYGGDDDED 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03214 174 ProSitePatterns NF-YB/HAP3 subunit signature. 81 97 IPR003956 GO:0005634|GO:0006355|GO:0043565
Arst2g03214 174 FunFam Nuclear transcription factor Y subunit B-3 39 163 - -
Arst2g03214 174 SUPERFAMILY Histone-fold 47 153 IPR009072 GO:0046982
Arst2g03214 174 Gene3D Histone, subunit A 38 166 IPR009072 GO:0046982
Arst2g03214 174 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Arst2g03214 174 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Arst2g03214 174 PRINTS CCAAT-binding transcription factor subunit A signature 116 134 - -
Arst2g03214 174 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 50 114 IPR003958 -
Arst2g03214 174 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 29 155 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03214 Arst-Chr2 89805192 89805983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03214 29 143 CCAAT-HAP3 Transcription Factor Family AT2G47810 72.441 1.52e-63 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Arst2g03214 CBFD_NFYB_HMF 1.8e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03214 K08065 - mnt:21392404 209.534