Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03211 ATGTCAAACATTTCAGGTGAAGATACTAATAATAATAATGGTAGTTTCTCCTCAGAAGAACAACTACAGGAGAATGAAGAACAGCAACAGTTGCAATTACAAAATCACCCTCATCATCATCATCATCATGGTTCAAGTTCTTCTAGTGCTTGCAAAAACAACAACTCCACAAGTCAAGAACAAAAGCAACAAGTTGGAATCAAGAAGAAAAGAAACCAACCTGGAAATCCAGATCCAAATGCAGAAGTGATTGCATTATCACCAACCACATTAATGGCAACAAATAGATTCATATGTGAGATATGCAACAAAGGGTTTCAGAGGGACCAAAACCTTCAGTTACATAGGAGAGGTCACAATCTACCATGGAAGCTAAGGCAAAGAGCAACAACAGAAGAGGCGATGAAGAAGAGGGTGTACGTGTGCCCCGAAAAATCGTGTGTGCACCATAACCCTGCCCGAGCACTGGGGGACCTCACTGGGATAAAGAAACATTACAGCAGGAAACATGGTGAGAAGAAGTGGAAATGTGACAAGTGTTCAAAGAAATATGCTGTTCAATCTGATTGGAAGGCTCATCTGAAAACATGTGGCACTAGGGAATATAAATGTGATTGTGGAACTATATTCTCCAGAAGGGACAGCTTCATAACACACAGGGCCTTTTGTGATGCATTAACTGAGGAAAACAACAGAATAAATCAACAAGGATTAACAAATGGGGTGCCACAAAACTTGCAAAATGAACAAGTCTCTGATCTTATAGCCACAATGCCCCTAAGCAACAGTAATGCATCAGAACTCAACAGCAATAACCATAACAATCCACTTAGAACACTCTCACAAGAGATTGTACCTGTGCCATTCAAGTCCATGAGCATTGGTGGGGGCATTTTCTCCCCAACAAGTTCATCATCAGGTACACTATTTGGTGGTCCAAAGAGCATGCACCCTCTTCCTACCTCTTCTTCAAGCCTTCAACTCAGTTCCAACAACTCCACTGGTTTCAATTACTTCCAAGATAGCAGCAAGAACTTGGGTCTAGTTTCCAGCTCAGCTCACATGTCTGCAACTGCATTATTGCAGAAAGCAGCACAAATGGGTGCTGCTGCAAGCAGCAGCAGCATTAACTCCCCCATGATGCAAAAACCCTTTGTTACTACCATGGCCGGTCCTGACCAAGTTTCTGGTGCTGCTACGGCTATGCAGCACCATAACCGTAATAACCCTCCTTCCTATGATCATCACTTCAATCCACAGGCTGATCAATTTTTTCATAAAAGGCAGCAAGAAATGCCACTGATATTTGAAGCTAATAACAATAGTAATGATGGGTCAACAACA 1344 0.4204 MSNISGEDTNNNNGSFSSEEQLQENEEQQQLQLQNHPHHHHHHGSSSSSACKNNNSTSQEQKQQVGIKKKRNQPGNPDPNAEVIALSPTTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRATTEEAMKKRVYVCPEKSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHLKTCGTREYKCDCGTIFSRRDSFITHRAFCDALTEENNRINQQGLTNGVPQNLQNEQVSDLIATMPLSNSNASELNSNNHNNPLRTLSQEIVPVPFKSMSIGGGIFSPTSSSSGTLFGGPKSMHPLPTSSSSLQLSSNNSTGFNYFQDSSKNLGLVSSSAHMSATALLQKAAQMGAAASSSSINSPMMQKPFVTTMAGPDQVSGAATAMQHHNRNNPPSYDHHFNPQADQFFHKRQQEMPLIFEANNNSNDGSTT 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03211 448 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Arst2g03211 448 SMART c2h2final6 97 119 IPR013087 -
Arst2g03211 448 SMART c2h2final6 175 195 IPR013087 -
Arst2g03211 448 SMART c2h2final6 140 170 IPR013087 -
Arst2g03211 448 MobiDBLite consensus disorder prediction 1 32 - -
Arst2g03211 448 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 45 399 IPR031140 -
Arst2g03211 448 MobiDBLite consensus disorder prediction 305 327 - -
Arst2g03211 448 Gene3D Classic Zinc Finger 75 150 - -
Arst2g03211 448 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 119 IPR013087 -
Arst2g03211 448 MobiDBLite consensus disorder prediction 47 63 - -
Arst2g03211 448 MobiDBLite consensus disorder prediction 1 82 - -
Arst2g03211 448 Gene3D Classic Zinc Finger 153 233 - -
Arst2g03211 448 FunFam protein indeterminate-domain 12-like 76 146 - -
Arst2g03211 448 FunFam protein indeterminate-domain 5, chloroplastic-like 153 232 - -
Arst2g03211 448 Pfam Zinc-finger double-stranded RNA-binding 97 119 IPR022755 -
Arst2g03211 448 SUPERFAMILY beta-beta-alpha zinc fingers 96 195 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03211 Arst-Chr2 89747138 89751220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03211 68 376 IDZ Gene Family AT3G50700 54.655 2.19e-111 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst2g03211 zf-C2H2_jaz 6.4e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03211 - - ahf:112730641 792.341