Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03153 ATGGATAAAGCGGTTGATTCCAGTGGTGAGAATAAGCAGGATCAAGGGTGTAAGAACAAGCGAAAATCGGTTCATCCTTCCGTAGCTGTTGCCAGTGCCCCCACATCTTTGATTGAGTTCCCTCGGTATGAATTACCGTTGGAGCTTCCACAAAGCTTAAATGGTACTAATCCATCTGAGGTAGTATCAGATTGGTATAGAGTAGAATCAGAAATGCGTATGAACGAGCTTGTGGATTGGAATGATCCTATTGCAAACCAGCTTGAGGAATTACTGTTGTCTAATTTGCAAGCTGTTTTTCATGCTGCAATCAAGCAGATTGTTGAATTAGGATATGGTGAAGAGGTGGCTCACATGTCCATTTCAAGGAGAGCCTTATACATAGAGGAAGGAGACCCTGTCTCAAATATTGTACAGGATACAGTGAATATTCTTAAGGGAAAAGATGTTGCTGGTTCGGATGTCGTGTTTGAAAATTTTCAGCATTTGCTGTACTACACCATGTTGGAGATGATCAGTGTACTTCGCGAAGTTAGACCGTCCTTAACAGCTGGCGAAGCAATGTGGCTTTTGTTGATGTGTGACTTGAACATCTCACTAGCCTGTTCAGCAGAAGATCGCCCGAGTGGTGTTGTTCAGAATGGGGAAAGCTCTTCTGGTTCTTCTGTTCCCCAGTCAAAGCCAGAGGTTCAAATCTCTGAATCTGACATAATTATTGAGCCAACTGTCCCAAAGGAATTGCCCCATAGTCACCAGAACAAGTCTGAAGCACCTAAGTTCGGAAGTTTCCAGAATACCCCGAACAGTCAAAGTCTTCTTGTTTCAGAAGGGGGAAAGCTTCATAAGGGGAATGCTTCTTTGCTGGTCGCTACAGAGAAATCCACAGGAACTTCAGTGGGTCCTGCTAAGGAATCTAAACCCGGGTCTAGTTCCAAGCGCCATAACAGAAAAGAAATAGTAGCACTTAGGCAGAAGTTCCTTCATATGGAGAAAGCTTACAGGGCTTGTGGAAAAGGTGGTTTTAAATCAGGGAAGCTTACAAGTGTAAGTAGTTTGGTTGTTGAAAAAAGAATCAAGCAACCATCTGAAATTCCTAATCAGCAAATGAAGTGTGGTTCCTCAAATTCAACAAGCACAAAAGGAGTTCACTCAGCTGATGCAGCATGCTGTGTTTCGACCAATAGTTCCTCTACTTCAAATGGAAGAGGTAACACCGGAACATTACCTACAAAGGATGCAACATCTGCTTCTACTGTAGTCAATTCTACTACAGTGTCAGACACTACATCCAAGCCTAAGTCTGAACCTAGTTCCACTGACAATCAAAAGATTCTTGATTTCTGTGCCGGTATTCCTTATGATGAGTCTTTGGGTAAGTATGTGCCAAGAGATGAAAAGGATGAACTAACTTTGATGTTAATAGCTCGCGTGCAAGAATTGCAGTTTGGGATGCAAAGCTGGAACAACTGGACAAAACAAAAAGTTATGCAAGTTACTGAGAGGCTCGGAAAAGTGCAGAGTGAGCTTAAAGCTCTTAGGAAGGAGAAGCAAGAAGCCGACCTATATAAAAAAGATCAGAAACTTTTGGAGGAGAATGCAGTGAAGAGAATCTCTGAGATGGAGAATGCCATGGAGAATACTAGAAAGCAAATTGAGCATGCTACTTCTGCTGCAGTTGAGCTAGAGGCAGAGAACGCTTCGCTGAAGAAGGAATTGGATGATGCGAAGTTGTGGGTTCTAAAGTCGATGACAAGCCATCGACAAGCACTTGAGAGAGAGCAGATTGTTCTTAAACAGCTTCAATCATGGGAGAGCCAAAATGGTTTACTTCGAGATGAGCTTGATGGAGAGAAGCACAGTTTATCTAACCTACTACAAGTGCTACACAAGGAGAAAAATCTTCTAGCCAACATTGAGGGTAGACTGGAACAAGAGAGAGCTGTGAAAGAAAAGCTCCTTGCACAGGCAGCATCCATTAGAAAGGAAAGACAACAACTCGAAGCGCACATCAAATCTGAAGAGGATACTATTAGAAAAAGGGCAGCTAATGATATGCAGAAATATGTGGATGATATTGCAAGGCTTGAGAAAGAGTTGATTGAGTTAAAAATAAAATCCGAGTCTGAACAAATAGCAGCTCTTCGCAGGGGTGTTGATGGTAAAAATGACAAGTTCTCCAGAACCAGCAAAAATACTCTTACGGTGAAGGAGAACAAGAAATCTAATGCGTCCCAAACGATGGTTAGCAATCGAGATAAAATGTCTACCGGAAGCTTGAGGCGAGAGCAGGAGTGTGTCATGTGCCTATCAGACGAGATGTCAGTGGTTTTTCTGCCGTGCGCACACCAGGTTGTTTGTCAAGACTGCAACGAACTCCACGAGAAGCAAGGGATGAAGGATTGCCCTTCATGTAGGACCCCAATCCAACGGAGGATTCATGCAAGATTTGCCGGACATTCGAGGGCATAG 2469 0.4313 MDKAVDSSGENKQDQGCKNKRKSVHPSVAVASAPTSLIEFPRYELPLELPQSLNGTNPSEVVSDWYRVESEMRMNELVDWNDPIANQLEELLLSNLQAVFHAAIKQIVELGYGEEVAHMSISRRALYIEEGDPVSNIVQDTVNILKGKDVAGSDVVFENFQHLLYYTMLEMISVLREVRPSLTAGEAMWLLLMCDLNISLACSAEDRPSGVVQNGESSSGSSVPQSKPEVQISESDIIIEPTVPKELPHSHQNKSEAPKFGSFQNTPNSQSLLVSEGGKLHKGNASLLVATEKSTGTSVGPAKESKPGSSSKRHNRKEIVALRQKFLHMEKAYRACGKGGFKSGKLTSVSSLVVEKRIKQPSEIPNQQMKCGSSNSTSTKGVHSADAACCVSTNSSSTSNGRGNTGTLPTKDATSASTVVNSTTVSDTTSKPKSEPSSTDNQKILDFCAGIPYDESLGKYVPRDEKDELTLMLIARVQELQFGMQSWNNWTKQKVMQVTERLGKVQSELKALRKEKQEADLYKKDQKLLEENAVKRISEMENAMENTRKQIEHATSAAVELEAENASLKKELDDAKLWVLKSMTSHRQALEREQIVLKQLQSWESQNGLLRDELDGEKHSLSNLLQVLHKEKNLLANIEGRLEQERAVKEKLLAQAASIRKERQQLEAHIKSEEDTIRKRAANDMQKYVDDIARLEKELIELKIKSESEQIAALRRGVDGKNDKFSRTSKNTLTVKENKKSNASQTMVSNRDKMSTGSLRREQECVMCLSDEMSVVFLPCAHQVVCQDCNELHEKQGMKDCPSCRTPIQRRIHARFAGHSRA 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03153 822 Pfam Zinc finger, C3HC4 type (RING finger) 762 810 - -
Arst2g03153 822 MobiDBLite consensus disorder prediction 209 274 - -
Arst2g03153 822 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 737 815 IPR013083 -
Arst2g03153 822 ProSiteProfiles Zinc finger RING-type profile. 765 805 IPR001841 -
Arst2g03153 822 MobiDBLite consensus disorder prediction 210 232 - -
Arst2g03153 822 PANTHER OS05G0141500 PROTEIN 8 814 IPR046934 -
Arst2g03153 822 MobiDBLite consensus disorder prediction 1 21 - -
Arst2g03153 822 SUPERFAMILY RING/U-box 759 811 - -
Arst2g03153 822 MobiDBLite consensus disorder prediction 393 441 - -
Arst2g03153 822 CDD RING-HC_MIP1-like 760 812 - -
Arst2g03153 822 Pfam Family of unknown function (DUF6592) 95 204 IPR046527 -
Arst2g03153 822 Coils Coil 495 578 - -
Arst2g03153 822 Coils Coil 678 712 - -
Arst2g03153 822 MobiDBLite consensus disorder prediction 291 317 - -
Arst2g03153 822 Coils Coil 628 676 - -
Arst2g03153 822 MobiDBLite consensus disorder prediction 1 25 - -
Arst2g03153 822 MobiDBLite consensus disorder prediction 291 305 - -
Arst2g03153 822 MobiDBLite consensus disorder prediction 255 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03153 Arst-Chr2 89180575 89185130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03153 765 812 C3H Transcription Factor Family AT1G73950 41.667 7.91e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03153 - - gmx:100793172 1017.68