Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03123 ATGGGGAGTTCAGGTACGAACTTGGTGACTACAATAATTGGTTTTGGATTGAGTGCAACATTCATAGTGTTTGTGTGCACAAGAATCATTTGTGGGAGAATTCAAAGGTATATAGCATCATCATCATCTTCATCATCAAGGACTATATACGAATTTCAATCAAGACCAGACATAGAACGGGGAGAACATGTTGTTGTTGAGGGAGTACCTGCTTTTGTTTCTGCAATCCCCACTTTAAAGTTCAACCAAGAGGCTTTCAGCTCCGTTGAATGTACACAGTGTGTGATATGTTTGGCAGATTACAAAGAGCAAGAATTGTTGAGGATGATACCAAAATGTGGGCACTGTTTTCATGTCTCTTGCATTGATATGTGGCTAAGAAAGCAATCTACATGCCCTGTATGCCGTTTGCCACTTAGAAATGCTCTTGAACAAAAGAATGTGACAAGTTTGGCATTCACAATAAGCCACCACCACTCTCTTGATGAAGAGTATAATACTTCATTACAAAGGAACATTAGTAGTGATGATGAGAGGCCAGTAGTTGATTCTAATTATAGTAACACCTCACTTCCAATTTCTGTAGGAGAACCTGATATAAGACCCTGA 609 0.3924 MGSSGTNLVTTIIGFGLSATFIVFVCTRIICGRIQRYIASSSSSSSRTIYEFQSRPDIERGEHVVVEGVPAFVSAIPTLKFNQEAFSSVECTQCVICLADYKEQELLRMIPKCGHCFHVSCIDMWLRKQSTCPVCRLPLRNALEQKNVTSLAFTISHHHSLDEEYNTSLQRNISSDDERPVVDSNYSNTSLPISVGEPDIRP 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03123 202 PANTHER OS11G0150450 PROTEIN 1 174 - -
Arst2g03123 202 MobiDBLite consensus disorder prediction 172 202 - -
Arst2g03123 202 SUPERFAMILY RING/U-box 93 147 - -
Arst2g03123 202 ProSiteProfiles Zinc finger RING-type profile. 94 136 IPR001841 -
Arst2g03123 202 SMART ring_2 94 135 IPR001841 -
Arst2g03123 202 Pfam Ring finger domain 93 136 IPR001841 -
Arst2g03123 202 CDD RING-H2_EL5-like 93 136 - -
Arst2g03123 202 MobiDBLite consensus disorder prediction 172 194 - -
Arst2g03123 202 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 145 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03123 Arst-Chr2 88846015 88847773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03123 70 142 C3H Transcription Factor Family AT4G33565 42.466 1.07e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03123 - - adu:107475875 408.683