Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03121 ATGGCAGGGGATGAAGCTATTAAACATGCTTCTACAACCACCACCACCACTACTCCTATGTCAAAATCAAACAAATCAACCATGAAAAGGTTCATTGGTGTGAGGCAGAGGCCTTCAGGAAGATGGGTGGCTGAGATCAAAGACTCATCACAACATGTGAGATTATGGCTTGGGACCTATGACACACCAGAGGAGGCTGCAAGGGCCTATGACGAAGCGGCACGTGTCCTACGAGGCGAAAATGCAAGAACAAACTTTGCATTATTTGGTTCTGATACCAATGGAAGTTCCAGTAAATTGTTACCTGAGTCTGACGGAAAAAGCAGACTGAGTTTCCCTTCATTAAAAGCGAAACTCAGTAAGAATCTTCAAAACATTATAGCAAGAACAAGCGATAATAACAATAACAGTATGAAATCTTCGTCGGCAAAGAGTAGGGTGAGTGATCATTTCACTTTTGCTAGCATATTCAAAAGAAGAAATTGTTACCAACAATACCCTCATCAAATGCCTAGTCCAATTGATATGAAGAACATTGATAAAGTTGTGCAACCTAGTATCATTGTTCCCCCTTTGGAAAATGATCATAACCACAACAATAATCATAATGGTTCTTCATCATCATGGGAAAATTCTAGTGTTTCTGATTGTAGCAGCTGTGATTGGTTCGGATCAGATTTTGGAGATTTCAGTGTTGGTGATCAAGGGTATTTGGATCAATTGTTGGGGTGGGTTGAAAGTTCAAATCTTTGTTCAAATGGGGTTGGTGATTTTGATGATGAGAGTTCAAGGAGTAAGAGGTTTAAGGTGTCTTCTACAGTGCTTGTTCCTCCAACTTTCACATCTTCATCATATGATTATTGTGGTTCACCTTATGATTATTATAATTATAATACTAATAATGGATGTGGCTCTCCATGTAGTGGTTATGCCTCTCCATATAATGGTAGGAAGTAA 957 0.3918 MAGDEAIKHASTTTTTTTPMSKSNKSTMKRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDTPEEAARAYDEAARVLRGENARTNFALFGSDTNGSSSKLLPESDGKSRLSFPSLKAKLSKNLQNIIARTSDNNNNSMKSSSAKSRVSDHFTFASIFKRRNCYQQYPHQMPSPIDMKNIDKVVQPSIIVPPLENDHNHNNNHNGSSSSWENSSVSDCSSCDWFGSDFGDFSVGDQGYLDQLLGWVESSNLCSNGVGDFDDESSRSKRFKVSSTVLVPPTFTSSSYDYCGSPYDYYNYNTNNGCGSPCSGYASPYNGRK 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03121 318 FunFam ethylene-responsive transcription factor RAP2-11 29 88 - -
Arst2g03121 318 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Arst2g03121 318 Gene3D AP2/ERF domain 29 88 IPR036955 GO:0003700|GO:0006355
Arst2g03121 318 SUPERFAMILY DNA-binding domain 30 87 IPR016177 GO:0003677
Arst2g03121 318 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 16 194 - -
Arst2g03121 318 MobiDBLite consensus disorder prediction 1 27 - -
Arst2g03121 318 CDD AP2 29 87 IPR001471 GO:0003700|GO:0006355
Arst2g03121 318 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Arst2g03121 318 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Arst2g03121 318 MobiDBLite consensus disorder prediction 8 27 - -
Arst2g03121 318 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Arst2g03121 318 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03121 Arst-Chr2 88831789 88832745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03121 7 87 AP2-EREBP Transcription Factor Family AT5G19790 61.728 1.59e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst2g03121 AP2 3.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03121 K09286 - gmx:100799444 333.569