Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03120 ATGAGACCCGTGTTTTGCGGAAACCTGGACTTCGACGCGCGTCAATCTGATGTTGAGAGGCTCTTCAAAAGATACGGGAAGGTTGAAAGAGTGGACATGAAATCTGGGTTTGCTTTTATCTACATGGAAGATGAAAGGGATGCTGAGTATGCAATCAGAAGACTTGATAGAACCGAATTTGGAAGAAAGGGGCGCCGTATACGTGTTGAGTGGACAAAGCAAGAACGGGACAGCAGAAGGTCAGGTGATTCAAGAAAATCCTCAAGTAATTCAAGACCATCGAAGACTTTGTTTATCATAAATTTTGATCCAGTTCACACCAGGACAAGGGATCTGGAGAGACACTTTGATCCCTATGGGAAAATATCAAATATAAGGATCAGGAGGAATTTTGCTTTTATACAATATGAAACTCAGGAGGATGCTACAAGAGCTTTGGAAGCAACAAACTTGAGCAAATTTATGGATCGTGTTATCACAGTGGAGTATGCTATTAAAGATGATGACGACAGGAGGAATGGATACAGTCCTGATAGAAGAGCAATGACTCCCCTGATGGGAGATATGGCCGGGGCAGATCCCCGAGTCCATATCGCAGAGGTAGGGGTAGCCCAGATTATGGTCATGGATCGAATCCAGCTTCCAGACCAGAACCAAGAGGAAGCCCAAAGTATGAACGAGGTGAAAGCCCAGTCAATGGCAGATATGACAGCCGGTCTCCTCCTCCACGAGAAAGGTCTCCTCCTCCACGTGAAAGGTCGTCTCCCCCACGTGAAAGGTCGCGATCCTGAGGAGTAA 798 0.4612 MRPVFCGNLDFDARQSDVERLFKRYGKVERVDMKSGFAFIYMEDERDAEYAIRRLDRTEFGRKGRRIRVEWTKQERDSRRSGDSRKSSSNSRPSKTLFIINFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYETQEDATRALEATNLSKFMDRVITVEYAIKDDDDRRNGYSPDRRAMTPLMGDMAGADPRVHIAEVGVAQIMVMDRIQLPDQNQEEAQSMNEVKAQSMADMTAGLLLHEKGLLLHVKGRLPHVKGRDPEE 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03120 265 SMART rrm1_1 96 162 IPR000504 GO:0003723
Arst2g03120 265 SMART rrm1_1 3 70 IPR000504 GO:0003723
Arst2g03120 265 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 95 166 IPR000504 GO:0003723
Arst2g03120 265 SUPERFAMILY RNA-binding domain, RBD 2 170 IPR035979 GO:0003676
Arst2g03120 265 Gene3D - 87 176 IPR012677 -
Arst2g03120 265 Gene3D - 1 86 IPR012677 -
Arst2g03120 265 MobiDBLite consensus disorder prediction 72 93 - -
Arst2g03120 265 FunFam Serine/arginine-rich splicing factor RS31 87 177 - -
Arst2g03120 265 FunFam Serine/arginine-rich splicing factor RS31 1 85 - -
Arst2g03120 265 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 106 174 - -
Arst2g03120 265 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 2 74 IPR000504 GO:0003723
Arst2g03120 265 MobiDBLite consensus disorder prediction 72 86 - -
Arst2g03120 265 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 63 IPR000504 GO:0003723
Arst2g03120 265 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 97 159 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03120 Arst-Chr2 88826974 88830286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03120 4 169 Eukaryotic Initiation Factors Gene Family AT1G49760 22.951 3.38e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03120 K12893 - gmx:100815452 318.546