Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03107 ATGGCTGCGTCAGTGGGTGGAAGTAGGCTTCAAAGCATGTTGCAAGCTGCAGTTCAATCTGTTCAATGGACCTACAGCCTCTTCTGGCAACTTTGTCCACAACAAATGATTTTGGTTTGGGGCGATGGTTACTACAATGGAGCAATTAAGACAAGGAAGACAGTGCAACCAATGGAGGTTAGTGCTGAGGAGGCATCTCTCCAAAGAAGCCAACAGCTCAGGGAACTCTATGACTCCTTGTCCGCCGGAGAGACGAATCCGCCCACTCGCCGCCCTTGCGCCGCCTTGTCGCCGGAGGACCTAACGGAATCCGAATGGTTCTATTTGATGTGTGTCTCATTCTCATTTCCTCCTGCTGTTGGGTTGCCGGGAAAGGCATATGCTAGGAGGCAGCATGTATGGCTCACAGGTGCAAACAAAAAAATGAGAAAAATAATACTAATTTTACAAAAATGATTTGTGCCATGCAAATTACAGACCGTGGTGTGCATTCCTCTATTGGACGGTGTCGTTGAGTTTGGCACAATAGATAAGGTTCAAGAAGATATTAAGTTTATCCAACACGTGAAGAGTTTTTTCATAGAACACCACCACGCCTCCGTCCATCCTCCGCCGCCGCCAAAGCCAGCCCTCTCAGAGCACTCCACCTCCAATCCTGCATCCTCATCTGACTGCCTCATTTATACCGTAACGGACCCACCATTTCCTCCGCCTAACCTTACCAATGAAGACAATATGGAAGAAGACCAAGACAATGAGGAAGAAGAAGAGGAAGAGGAGGACGAGAATGATGAAGAAGAAGAACCCATATTGGACTCTGAAGATGAAAAGAGACGAAATAATAATAATGTTTCAGGTGGAATTACAGAACCAAGTGAGTTGATGCAATTAGAAATGTCTGAAGATATTAGAGTTGGATCACCTAATGACGGATCAAATAATCTTGATTCCAATTTTCATTTACTAGCCGTTACCGAAGCAGATAATCAGTCGGGTCAAGTCGACTCTTATCGAGTTGACCCGACCCAAAGATGGGATCCAATTCAAAGCCCTTTGGATCAGCTCCAAGTTCAACTACCAGTCTTTTCACCTATAGAAGATCAAATATTGACACAAGAAGATGATCACTATTCTCAAACCGTATCAAGCATCCTCCAAAACCAATCAACCCGTTGGGTTGACTCTCCTTCAATAGCATGCTACGTCACTTGCTCCAACCAATCAGCATTCGCCAAGTGGACATCCCTCGTCGCCGACGAACATCTCCACGCCGCCACGGTCGACGGCTCCTCCCAATGGCTACTAAAATACATCTTATTTACCGTGCCCTACCTACACTCCAACAAAAACAATGAAGAAAACAATAGTTCTCCAAATAACACAAACCCTACCAGCTCAGCCGGTCCGTCAGACCGGCTGCGCGGAGGGGGAAAAGGCAGTGGCACTCCGCAAGACGAGCTGAGTGCAAACCATGTCCTGGCGGAGCGCCGCCGCCGTGAGAAGCTAAATGAGAGATTCATCATCCTAAGATCACTTGTCCCATTTGTTACCAAAATGGACAAAGCTTCAATTTTAGGTGACACAATTGAATATGTGAAACAACTTAGAAGGAAGATCCAAGACTTAGAGGCACATATCCGACAAATGGAAGCTGAACAACAACGTTCGAGGACACCATCAACAACAATTGAAGTTCACCATTGTGGCTCCTCCAACAAGGAGCAACAACAACACACGGTTGTGGTAGGGCATGAGAAGAGGAAGGTGAGGATTGTGGAGGGGACGAAGACCGCAACCAAGGTGGTGGCGGCGGCGGCCACAGAGGCATCGGTGCAGGTTTCGATTATAGAGAGTGATGCATTGTTGGAGTTGGAGTGTAGTCATAGGGAAGGGTTACTACTTGATGTGATGTTGGTGTTAAGAGAGATGAAGATTGAGGTTATTGGGGTTCAATCCTCACTCAACAATGGAGTTTTTGTGGCTGAATTGAGGGCCAAGGTTAAGGACAATAATTCTGGGAAGAAGGTTAGCATTGTGGAAGTCAAGAGGGCATTAAATCAGGTTATACCCCATACTGGTGATTAA 2085 0.4638 MAASVGGSRLQSMLQAAVQSVQWTYSLFWQLCPQQMILVWGDGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYDSLSAGETNPPTRRPCAALSPEDLTESEWFYLMCVSFSFPPAVGLPGKAYARRQHVWLTGANKKMRKIILILQKXFVPCKLQTVVCIPLLDGVVEFGTIDKVQEDIKFIQHVKSFFIEHHHASVHPPPPPKPALSEHSTSNPASSSDCLIYTVTDPPFPPPNLTNEDNMEEDQDNEEEEEEEEDENDEEEEPILDSEDEKRRNNNNVSGGITEPSELMQLEMSEDIRVGSPNDGSNNLDSNFHLLAVTEADNQSGQVDSYRVDPTQRWDPIQSPLDQLQVQLPVFSPIEDQILTQEDDHYSQTVSSILQNQSTRWVDSPSIACYVTCSNQSAFAKWTSLVADEHLHAATVDGSSQWLLKYILFTVPYLHSNKNNEENNSSPNNTNPTSSAGPSDRLRGGGKGSGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQDLEAHIRQMEAEQQRSRTPSTTIEVHHCGSSNKEQQQHTVVVGHEKRKVRIVEGTKTATKVVAAAATEASVQVSIIESDALLELECSHREGLLLDVMLVLREMKIEVIGVQSSLNNGVFVAELRAKVKDNNSGKKVSIVEVKRALNQVIPHTGD 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03107 694 SMART finulus 492 541 IPR011598 GO:0046983
Arst2g03107 694 MobiDBLite consensus disorder prediction 448 492 - -
Arst2g03107 694 MobiDBLite consensus disorder prediction 197 316 - -
Arst2g03107 694 Coils Coil 243 268 - -
Arst2g03107 694 MobiDBLite consensus disorder prediction 448 469 - -
Arst2g03107 694 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 488 559 IPR036638 GO:0046983
Arst2g03107 694 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 10 193 IPR025610 -
Arst2g03107 694 MobiDBLite consensus disorder prediction 213 228 - -
Arst2g03107 694 Pfam Helix-loop-helix DNA-binding domain 489 536 IPR011598 GO:0046983
Arst2g03107 694 Coils Coil 532 555 - -
Arst2g03107 694 PANTHER TRANSCRIPTION FACTOR TT8 8 690 - -
Arst2g03107 694 MobiDBLite consensus disorder prediction 244 271 - -
Arst2g03107 694 Gene3D - 482 553 IPR036638 GO:0046983
Arst2g03107 694 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 486 535 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03107 Arst-Chr2 88668989 88681486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03107 370 691 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 41.486 1.65e-56 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst2g03107 bHLH-MYC_N 4.1e-46 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03107 - - adu:107475781 1260.74