Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03084 ATGACCACCACTATTTCAATGTTCATGTCTAGATTAACACAACCCTTAATAAATGTTCCTACTAGCAATGTCCCAAAATTGAATGTGAGGCAAATTCAGAAAGAGAAAGTAGTTTTGATCATGGGAGCCACAGGAGCTGGAAAGTCAAAGCTTTCCGTTGACCTTGCAACATGTTTTCCTTCAGAAATCATCAACTCAGACAAAATCCAAGTGTATGAAGGACTTGACATAGTTACAAACAAAATCTCCAAAGAAGAGCAAAAAGGGGTGCCACATCACTTACTAGGGACACAAAATCCCAACATTGATTTCACATCCTATGATTTTTGTGACATGTCACTAGGTGCCATTGACTCAATCACTAGGAGGGAACAGCTTCCAATCATAGTTGGTGGATCCAATTCATACCTTGAAGCCCTAATTGATGATGATGATTACAAATTCAGATCAAGGTATGATTTTTGTTGCCTTTGGGTGGATGTGAAAATGGATGTTCTTGATTCATATGTGCAAAAAAGGGTTGACCAAATGTACCTAAATGGTATGGTCAATGAGCTTAGACCCTTTTTCAATCCCAATAATAAGGACTACTCAATTGGGATTAGAAAAGCAATTGGGGTGCCTGAATTTGATGAGTATTTTAGAAGAGAACATGTTGTTGATGAAGAAACAAAGCAAAGGTTGCTTGATGAAGCAATCAATGAAATCAAGGTCAACACTTGCAACTTGGCTAGGAAACAATTTGGAAAAATCCAAAGGCTAAGGAATGTTAAGAGATGGAAGATTCATAGGTTGGATGCAACACCTGTTTTCCAAAAACATGGACAAGAAGCAAATAAGGCATGGAACAAGTTTGTGTTGGAGCCTAGTGCTATGATTATTGCAAAGTTTTTATATAATAACAACTCATCATCATCATCATCATCATCATCCATCACTTCCAATAACAGAGTTGTTTCTGGATTTAGTAGTAGTGTTCCAGCTTCATCAGAGAGTGTTGTATGTGTGTGA 1011 0.3749 MTTTISMFMSRLTQPLINVPTSNVPKLNVRQIQKEKVVLIMGATGAGKSKLSVDLATCFPSEIINSDKIQVYEGLDIVTNKISKEEQKGVPHHLLGTQNPNIDFTSYDFCDMSLGAIDSITRREQLPIIVGGSNSYLEALIDDDDYKFRSRYDFCCLWVDVKMDVLDSYVQKRVDQMYLNGMVNELRPFFNPNNKDYSIGIRKAIGVPEFDEYFRREHVVDEETKQRLLDEAINEIKVNTCNLARKQFGKIQRLRNVKRWKIHRLDATPVFQKHGQEANKAWNKFVLEPSAMIIAKFLYNNNSSSSSSSSSITSNNRVVSGFSSSVPASSESVVCV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03084 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 145 IPR027417 -
Arst2g03084 336 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 163 262 - -
Arst2g03084 336 Pfam IPP transferase 148 248 - -
Arst2g03084 336 Pfam IPP transferase 70 143 - -
Arst2g03084 336 FunFam Adenylate isopentenyltransferase 5, chloroplastic 163 262 - -
Arst2g03084 336 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 34 297 IPR039657 -
Arst2g03084 336 Gene3D - 34 298 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03084 Arst-Chr2 88501444 88502764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03084 150 311 C2H2 Transcription Factor Family AT2G27760 31.217 1.75e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03084 K10760 - gmx:100803964 450.669