Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g03057 ATGGAGGAGCTTGTGAAGATTATTGAATGCATGGAACAGTATGAAAGGATTGTGATACCTGTTTTTTATAATGTTGATCCTTCTCATGTAAGGTATCAAAAAAGAACCTTTGCAGAAGCTTTTGATGTCCACAAAGAGAGATATGAAGAGAAAATTATGCAGAATTGGAAATCTGTTTTGAAGAAGACGGCAAATTTATCTGGAATTCATTATCCATCAAAATATCGAAATGAATCAGAACTCATCCAAGATATTGTCAAGAATATTTCGGAAAAATTGTCGCATCTTTTTTCAAATGCACCCCAAGACCTTGTCGGAATTGATGAGCATTTTAAATTTCTTCAACCTTTAATGGCAATGGAGTCTGATGAAGTTCGAACTGTGGGAATTTGGGGGATGGGAGGCATAGGTAAAACAACAATTGCTAGGGCAATATTCGACAGATATGCCTCTCGATATGAAAGTTGCTGCTTTCTAGAAAATGTAAGAGAAGAATCTCAAAAGTCTGGTAAACACAGCTTATATGAGAAACTTATTTCTGAACTACTTGAGGGAGAACATCTTGTGAAGGGATCAGCCCATGCAAGATCTATGTATGTCAAGAGAAAGTTGAGTCGGAAAAAGGTGCTCATAGTGCTTGATGATGTGGATGCATTAGACAAGTTAGATTATCTAACAACAGAAGCAATCTGTCTGGGAGCAGGTAGTAGGGTCATTGTAACAACAAGAGACGAGCAAATTCTAATTGCTAAAGGAGTGGATAAAAGATACAAGGTTTGGGGATTGAGCTTTGACAGTTCCCTTGAGCTTTTTTGCTTAAAAGCCTTTCACAAAAGCTGTCCTGAAAATGGATACAGAGAGCTTTCAAAAATGGCAGTTAATTACACAAAGGGCAATCCATTAGCATTAAAAGTATTGGGATCCTTTCTACACTCAAGGAGCATAAAAGAATGGGAAAGTGCATTGAAAAAACTCAGGGTTCATCCCAATGTGGACATCTACAATGTCTTAAAATTGAGTTATGATGGTTTAGATGATTCAGAAAAGAACATATTCCTTGACATTGCATTCTTTTTCAGAGGAGAATACAAGGGTAATGTTATAAGCTTTCTAGACTCGTGTGGTTTCTATGGCGACATTGGAATAAGCACTCTTGAGCGTAAAGCTCTTATAACTATTTTCGGCAATAGAATAGGAATGCATGACTTGATACAACAAATGGGTTGGGAAGTCGTTCGCCGAGAATCAAATAAAGATTCTGGAAAGCTCACTCGAATAAATAAAGCTGAAGATTTCTGCAACTTATTGAAAAATAGCGAGGAAAAAAGTTTAGTAGAAGGCATTATGATAGACTTGTCCCAAATTGGAGATCTACACTTAAATGCGAACACCTTTACAAATATGCCTCGTCTAAGATTTCTTAAGCTTTATGCTCCTTCGGATCAAAGACAGTCCAAAGTCTACATTCCCACAACCCTGGACCCGTTTCCTGCAAAAGTCAGCTATCTGGAGTGGAATAGTTGTCCTCTGAATTCTCTACCATTAAGGTTTTGTGCAGAAAAACTTGTTAATCTTAGGATGTGTAACAGTCAAATTTCTCAACTCTGGGATGGAGCACAGGATCTTGTGAATTTGATAGAGCTTAACCTTGGTGGATGTATAAAGTTGGAAGAGCTCCCAGACTTCAGTAAAGCAACGAAGCTTAAATGGTTAAACCTTTGGAATTGTCAAAATCTATGTCAACTTCATCCATCTATTTTATCCATCCAAACACTTGAGAGAGCTAATTGA 1791 0.3735 MEELVKIIECMEQYERIVIPVFYNVDPSHVRYQKRTFAEAFDVHKERYEEKIMQNWKSVLKKTANLSGIHYPSKYRNESELIQDIVKNISEKLSHLFSNAPQDLVGIDEHFKFLQPLMAMESDEVRTVGIWGMGGIGKTTIARAIFDRYASRYESCCFLENVREESQKSGKHSLYEKLISELLEGEHLVKGSAHARSMYVKRKLSRKKVLIVLDDVDALDKLDYLTTEAICLGAGSRVIVTTRDEQILIAKGVDKRYKVWGLSFDSSLELFCLKAFHKSCPENGYRELSKMAVNYTKGNPLALKVLGSFLHSRSIKEWESALKKLRVHPNVDIYNVLKLSYDGLDDSEKNIFLDIAFFFRGEYKGNVISFLDSCGFYGDIGISTLERKALITIFGNRIGMHDLIQQMGWEVVRRESNKDSGKLTRINKAEDFCNLLKNSEEKSLVEGIMIDLSQIGDLHLNANTFTNMPRLRFLKLYAPSDQRQSKVYIPTTLDPFPAKVSYLEWNSCPLNSLPLRFCAEKLVNLRMCNSQISQLWDGAQDLVNLIELNLGGCIKLEELPDFSKATKLKWLNLWNCQNLCQLHPSILSIQTLERAN 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g03057 596 SUPERFAMILY "Winged helix" DNA-binding domain 332 436 IPR036390 -
Arst2g03057 596 Gene3D - 93 252 IPR027417 -
Arst2g03057 596 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 594 IPR044974 GO:0006952
Arst2g03057 596 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 68 IPR035897 -
Arst2g03057 596 Pfam TIR domain 2 102 IPR000157 GO:0007165
Arst2g03057 596 PRINTS Disease resistance protein signature 296 310 - -
Arst2g03057 596 PRINTS Disease resistance protein signature 203 217 - -
Arst2g03057 596 PRINTS Disease resistance protein signature 127 142 - -
Arst2g03057 596 PRINTS Disease resistance protein signature 563 579 - -
Arst2g03057 596 ProSiteProfiles TIR domain profile. 1 93 IPR000157 GO:0007165
Arst2g03057 596 Gene3D Ribonuclease Inhibitor 416 596 IPR032675 -
Arst2g03057 596 Pfam NB-ARC domain 116 331 IPR002182 GO:0043531
Arst2g03057 596 Gene3D - 262 345 IPR042197 -
Arst2g03057 596 Gene3D - 1 92 IPR035897 -
Arst2g03057 596 SUPERFAMILY L domain-like 447 592 - -
Arst2g03057 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 355 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g03057 Arst-Chr2 88257366 88262052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g03057 4 576 WRKY Transcription Factor Family AT4G12020 31.911 4.62e-82 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g03057 - - adu:107475756 1167.14