Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02970 ATGACTTCTTCTTCTTCTTCATCCACTGCTCCTCAATTCAAATATGACGTCTTCATAAGTTTTAGAGGTTCAGACACTCGCCGTGGCTTTTTCAGCCATTTGCTTACAGCATTACGTCAGAAAAAGATTCATGTATATGTAGATTATAACCTTAAAGAAGGAAATGAAATATTACCAGCACTTTTCGCAGCAATTGAACAATCACAAATTGCATTAGTTATTTTCTCGAAAGACTATGCCTCTTCGAAATGGTGCTTAGAAGAGCTTGTCAAAATAACTGAATGCCAAAAAGAGAAGGGTCAAATCATCATACCTATTTTCTACAATGTAGAGCCTTCAGAAGTGCGACATCAGAAGAGGTCCTATGCAGAAGCATTTGTTAAACATGAAAATGATTTCAAGGACAAAGTCAATAAATGGAGAGCTGCACTGAAGGGAGTCTCAGATTTATCAGGATTCCATTCCAAAAATTTTAGAAGTGAGGCTGGGCTCATTGAAGAAGTTGTCAAACACATTTTGAAAACTTTAGATGATATGCACCCAGCTTATGACTTTCAAGGCCTTGTTGGAATTAATAAACCAGTCGACGAACTTGAGTCAATAGTTTTTGCCAATGGCTCAAAAGATATTCGTGTTATAGGAATTTGGGGCATGGGTGGCATTGGTAAGACTACTATTGCCACTGTATTATTTAACAAACTGTGTTCTCAATATGAAAGTCGTCATTTTCTAGCAAATGTCAGAAAGGAGTCAGAGAAGTGGGGAATAATTCAGTTAAGAGACAAAATTCTTTCTGTATTCACAGACGAAAAAGATTTAAACATTGGTGTTCCCAACGGAGTACCGAAACATGTTTTGAGAAAACTTCGTCGCAGAAAGATTCTTGTTGTTCTTGACGATGTTAGTACTTCTGATCAAATCACAAACTTAGTTGGAGGACATAATTGGTTGGGTCCTGGTAGTAGAATCATTGTTACAACTAGGGATAAACATGCAATTTGTAAAGCGGATGACATATACAAAGTAAAGGCATTGGAATCTAGTGATGCCCGACAGCTGCTAAGTTTGCATGCCTTTGATGGAACTGATGGGCATTGCCTTGAATTGCACTGGCATAATCTTGTGTCGAAAATGGTTGAATATGCTAAAGGCATCCCATTAGGATTGAAAGTTCTGGGTTCTTTTCTTTATGGCAAATGCTTTGAAGAATGGGAATGTCAATTCCAGAAGCTTCAGAAAATGCCCTTTCCAGAGATTCATAATGTGTTGAGATTAAGTTATGAAGGATTGGATCACCAAGAGAAGAGCATATTTTTATATGTTGCTTGTTTCTTCAAAGAGGATGAAGGAAAGGTTACTGTAGAGAATTTATTAGATGCTTGTGGTTACTCAACATCTATTGCATTAAAAACTCTCCAAGATAGAGCTCTTATAAGTATTGAACATTGTGTATCCATGCATGACTTGATTCGAGAAATGGGCCGATGGATTGTGCGTCAACAAAGCATCAATAAGCCTGGAGAACAACGTCATTTATGGGATCCTCATGACATTCATCGTGTATTGAAACATAGAGAGGGCACGGACCATATTGAAAGCTTAACCTGGAACATGTCAAGTGTTAGTGCTGACATAAGCCTAAGTCCTCATTTGTTTGCTAGAATGGAAAATCTAAAACTTCTGAGGTTTTATTACAATAATAATAATAGCAGTGATTATTACTATTATTATTATTATTGTTCGGATAATAGCACGTGCCAAGTGCATCTTCCAGAAGGTCTTGAAATACTGCCACAGAAACTACGACTCTTTCATTGGGACAATTACCCTGCAAAATCCTTTCCAACAACATTCAATGCAGAGTGTCTTGTTGAACTTCGTATGAAAGAAAGTCGCGTTGAAAAGCTCTGGGATGGTGTACAGGATATACCAAATATGAAAAGGATTGTTCTTAATGGATCCAAACAATTGATCGAGATTCCAGATTTATCTAAAGCCTTGAGTCTTCAAGAATTAGAACTCATGGGATGCATAAATTTGCTTTCGGTTCACCCATCAATTTTTTCTCTCCCAAAACTTGTTACGGTGACCCTATGGAATTGCCGAAGGCTTGAGAAACTTCCAGGGTGGTGTGAAGTGAAAAAGGAAGTATTGATTGAAGCATCAGCGTCATCAACATCATCGTGCTCAGGATCATCACATACTTCCCGCTCCAAGTTTCAGTACTTAAACTTGGATGGATGTGTGAATCTGATGCATCTGCCAGACAGCTTTTCTAATCTCACCACTCTTAAAGTGCTTTATCTTGGAGGGTGCATAAAATTAGACACATCAAATCTATACATCTTATTTAATGCCTTGTCTTCTTTAACACAGCTAGACTTGGATGGGTGTGATAAGTTGTATGAAATCCCACATAACATCAGCAACTTATCATTGTTAGAGTCGTTATCACTCAGGGAAACTAATGTGAAGAGCATTCCAGAAACTATCAGACACCTTCCACGCCTCAGAAATCTCTACTTAACCAGTTGCACGGTGCTCCGGTCAATTCCTCGAATTCCACCATCCCTCCATTGTTTAACAGCCAATAACTGCAAATCGTTGGAGAGAGTGTTCACTCCAACACCTGAACTACTCCAACAACACCTCGCATCCTATGAAAAGGAGTATTATATTGGAGGCACGGTTTTTTCATTCAGGAATTGCCCAAATTTAAAGAAAGATTCAATTGATGCTATTCGTGAATATGTCAAGTGCTGCAATGAAGAGAAGAGATCAATGAGAGAT 2790 0.3821 MTSSSSSSTAPQFKYDVFISFRGSDTRRGFFSHLLTALRQKKIHVYVDYNLKEGNEILPALFAAIEQSQIALVIFSKDYASSKWCLEELVKITECQKEKGQIIIPIFYNVEPSEVRHQKRSYAEAFVKHENDFKDKVNKWRAALKGVSDLSGFHSKNFRSEAGLIEEVVKHILKTLDDMHPAYDFQGLVGINKPVDELESIVFANGSKDIRVIGIWGMGGIGKTTIATVLFNKLCSQYESRHFLANVRKESEKWGIIQLRDKILSVFTDEKDLNIGVPNGVPKHVLRKLRRRKILVVLDDVSTSDQITNLVGGHNWLGPGSRIIVTTRDKHAICKADDIYKVKALESSDARQLLSLHAFDGTDGHCLELHWHNLVSKMVEYAKGIPLGLKVLGSFLYGKCFEEWECQFQKLQKMPFPEIHNVLRLSYEGLDHQEKSIFLYVACFFKEDEGKVTVENLLDACGYSTSIALKTLQDRALISIEHCVSMHDLIREMGRWIVRQQSINKPGEQRHLWDPHDIHRVLKHREGTDHIESLTWNMSSVSADISLSPHLFARMENLKLLRFYYNNNNSSDYYYYYYYCSDNSTCQVHLPEGLEILPQKLRLFHWDNYPAKSFPTTFNAECLVELRMKESRVEKLWDGVQDIPNMKRIVLNGSKQLIEIPDLSKALSLQELELMGCINLLSVHPSIFSLPKLVTVTLWNCRRLEKLPGWCEVKKEVLIEASASSTSSCSGSSHTSRSKFQYLNLDGCVNLMHLPDSFSNLTTLKVLYLGGCIKLDTSNLYILFNALSSLTQLDLDGCDKLYEIPHNISNLSLLESLSLRETNVKSIPETIRHLPRLRNLYLTSCTVLRSIPRIPPSLHCLTANNCKSLERVFTPTPELLQQHLASYEKEYYIGGTVFSFRNCPNLKKDSIDAIREYVKCCNEEKRSMRD 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02970 930 Gene3D - 177 341 IPR027417 -
Arst2g02970 930 SUPERFAMILY L domain-like 486 871 - -
Arst2g02970 930 Pfam NB-ARC domain 193 420 IPR002182 GO:0043531
Arst2g02970 930 ProSiteProfiles TIR domain profile. 13 176 IPR000157 GO:0007165
Arst2g02970 930 Pfam TIR domain 14 191 IPR000157 GO:0007165
Arst2g02970 930 Gene3D Ribonuclease Inhibitor 530 728 IPR032675 -
Arst2g02970 930 Pfam Leucine Rich Repeat 622 641 IPR011713 -
Arst2g02970 930 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 754 IPR044974 GO:0006952
Arst2g02970 930 Coils Coil 918 930 - -
Arst2g02970 930 Gene3D - 9 176 IPR035897 -
Arst2g02970 930 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 178 - -
Arst2g02970 930 Gene3D Ribonuclease Inhibitor 729 922 IPR032675 -
Arst2g02970 930 SMART till_3 14 150 IPR000157 GO:0007165
Arst2g02970 930 Gene3D - 344 431 IPR042197 -
Arst2g02970 930 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 153 IPR035897 -
Arst2g02970 930 PRINTS Disease resistance protein signature 785 801 - -
Arst2g02970 930 PRINTS Disease resistance protein signature 212 227 - -
Arst2g02970 930 PRINTS Disease resistance protein signature 288 302 - -
Arst2g02970 930 PRINTS Disease resistance protein signature 382 396 - -
Arst2g02970 930 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 440 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02970 Arst-Chr2 87278993 87284397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02970 15 861 WRKY Transcription Factor Family AT4G12020 31.402 1.39e-104 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02970 - - aip:107627842 1680.23