Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02949 ATGGACCCAGTCGCAGCACAAGGAAGACCTCTACCGCCTCCTTTTCTTACCAGAGACCTTCATCTACACCCTCACCATCAATTTCAACCACACCATAATCTCAACAACACCAACACCAACCAAACCACCGATTTGAATGACCAAAACCGTGGCCAAAAGCGTGACCGTGCCGATGACCAGAACCCCGCCACCCCTCCTTCTACTGGAGACGGCAAGGATCCGCACTCCGGCGGAGGAGAATCCGGCGAGATCTCCAGGAGACCCAGGGGGAGACCAGCAGGCTCCAAGAACAAGCCTAAGCCACCCATCATCATCACAAGGGACAGTGCAAATGCTTTAAGATCTCATGTCATGGAAGTTGCAAACGGTTGTGACATCATGGACAGTGTCACCGTCTTCGCACGGCGGCGCCAGCGCGGTGTTTGTATCCTCAGCGGCAGTGGAACGGTTACCAACGTCACTCTCCGGCAGCCGGCTTCGCCGGGTGCCGTAGTAACCCTACATGGTAGGTTTGAGATTCTGTCCTTGTCCGGATCATTTCTGCCGCCGCCGGCCCCGCCTGCAGCGTCAGGACTAGCCATATATCTGGCTGGTGGACAGGGACAGGTAGTAGGTGGGAGTGTGGTGGGCCCACTTTTGGCGGCCGGCCCGGTGGTGATCATGGCAGCCTCGTTCGGCAATGCAGCCTACGAGAGACTGCCACTAGAAGAGGAGGAGGGGTCCGTCCCCGTCTCAGGGAGCGGAGGCGGGGGACTAGGATCCCCTGGAATTGTCGGACAACAGCCACAGCCACAACCGCAACCGCAACAACTAGTGGGAGGAGATCCCAATAGTTCATCAATGTTTCATGGTGGAGTGCCTCAAAATCTTCTTAATTCATGCCAATTGCCAGCTGAAGGTTTCTGGGGTGGTTCCGGTGCACGCCCTCCCTTTTAA 936 0.5662 MDPVAAQGRPLPPPFLTRDLHLHPHHQFQPHHNLNNTNTNQTTDLNDQNRGQKRDRADDQNPATPPSTGDGKDPHSGGGESGEISRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEVANGCDIMDSVTVFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGSVVGPLLAAGPVVIMAASFGNAAYERLPLEEEEGSVPVSGSGGGGLGSPGIVGQQPQPQPQPQQLVGGDPNSSSMFHGGVPQNLLNSCQLPAEGFWGGSGARPPF 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02949 311 FunFam AT-hook motif nuclear-localized protein 113 240 - -
Arst2g02949 311 Pfam Plants and Prokaryotes Conserved (PCC) domain 114 226 IPR005175 -
Arst2g02949 311 Gene3D - 113 241 - -
Arst2g02949 311 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 41 293 IPR014476 GO:0003680
Arst2g02949 311 MobiDBLite consensus disorder prediction 239 288 - -
Arst2g02949 311 MobiDBLite consensus disorder prediction 258 288 - -
Arst2g02949 311 SUPERFAMILY AF0104/ALDC/Ptd012-like 110 239 - -
Arst2g02949 311 CDD DUF296 114 181 IPR005175 -
Arst2g02949 311 MobiDBLite consensus disorder prediction 29 47 - -
Arst2g02949 311 MobiDBLite consensus disorder prediction 24 104 - -
Arst2g02949 311 ProSiteProfiles PPC domain profile profile. 110 247 IPR005175 -
Arst2g02949 311 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02949 Arst-Chr2 87121883 87123558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02949 1 311 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 62.805 6.52e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02949 - - gmx:100816243 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst2g02949 2 87121883 87123558 Arst2g02949 2 87121883 87123558 ECH