Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02946 ATGAGTATGAACACTAGTTGTAGCGGAAGCCCTAGTGGTGGTGGCGGTGGTGGAAGCAGTAGTGGTGGTGGTGGCAGCAGCGGTGGCGGTGGCCCTTGTGGGGCTTGCAAATTCTTAAGGAGAAAGTGTGTACCCGGGTGTATATTTGCACCCTACTTTGATTCGGAGCAAGGTGCCACACATTTTGCGGCGGTTCACAAGGTTTTTGGTGCTAGCAATGTTTCAAAGCTTCTCATGAATATTCCAGTTCATAAAAGACTTGATGCTGTTGTCACTATTTGTTATGAAGCTCAAGCAAGACTTAGAGACCCTGTCTATGGCTGCGTTGCTCATATCTTTGCTCTTCAACAACAGATAGTGAATTTACAAGCAGAACTTTCATATTTACAAGGTTATCTTGCAACCCTTGAGTTACCTCATCCGCCACAACTACCTCCTACTCCGCCGCAACCAACCCTAGCCCCTCCGACTCTCTCGATCTCTGACCTCCCACCTCCACATCCCACTCCTGCCAGCACGGCTACCGTACCAATCACGTATGATTTGTCTTCACTCTTTGAACCTATGGCCCAAACTTCTTGGGCCATGCACAATAGGCCCATTGATGCACCCCGCCAATTTTTGAGTAGTGACACATCATCTTTACAGTCTAGTGGCGACGGTGGCGACGGTGGCGGCGGTGGTGATCTTCAAACACTGGCTCATGAGCTTTTGCGTAGACATGGAGTTGATCCTACTGCTCCTGTGGCATGTTCTAGTGCCCCCTCATCATCACAATCTCATTCAAAATGA 792 0.4899 MSMNTSCSGSPSGGGGGGSSSGGGGSSGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLMNIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQIVNLQAELSYLQGYLATLELPHPPQLPPTPPQPTLAPPTLSISDLPPPHPTPASTATVPITYDLSSLFEPMAQTSWAMHNRPIDAPRQFLSSDTSSLQSSGDGGDGGGGGDLQTLAHELLRRHGVDPTAPVACSSAPSSSQSHSK 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02946 263 ProSiteProfiles LOB domain profile. 31 133 IPR004883 -
Arst2g02946 263 Pfam Lateral organ boundaries (LOB) domain 32 130 IPR004883 -
Arst2g02946 263 PANTHER LOB DOMAIN CONTAINING PROTEIN 29 139 - -
Arst2g02946 263 MobiDBLite consensus disorder prediction 140 172 - -
Arst2g02946 263 MobiDBLite consensus disorder prediction 205 220 - -
Arst2g02946 263 MobiDBLite consensus disorder prediction 204 263 - -
Arst2g02946 263 MobiDBLite consensus disorder prediction 140 174 - -
Arst2g02946 263 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02946 Arst-Chr2 87050099 87056002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02946 34 260 AS2 family AT2G45420 60.086 1.45e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst2g02946 LOB 1.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02946 K21994 - cave:132188187 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g02935 4 104286952 104303552 Arst2g02946 2 87050099 87056002 PCT