Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02942 ATGGAAGCTAGAGAAGGCATTAGTTCCGGGGTTACGGTGATAGGGGCAGAAGCTCCATCAGCATATCATGTGGCACCAAGGAGTGAAGCTCCAAACCAGGTTCATGTGCCTGAGGGAGGCACGGCAGCTGTGGCTGCGGCTGCTGCTGCCGCTGCCGGGGTTTCTCCGGTGAGTGTGGGGATAGATGGATCGATGCTTAAGAAGAAACGGGGTAGACCGAGGAAATATGGGCCGGATGGATCTGTCACTATGGCATTGTCACCATTGCCACTCTCATCTTCAGGTCCACATTCAAATGACTTTTCGTCCGGTAAACGGGGGAAATCGAAGGGGACGGAGTACAAGCAGTCGAAAAAACTTGGGTTTGATCAACTAGGTGAATATAATGCATGTGCTGATGGTACAAACTTTCTGCCACATATCATCACTGTTAATGCTGGAGAGGACATTACCATGAAGGTTATATCGTTTTCTCAGCAAGGACCGCGAGCTATATGCATCTTATCTGCTAGTGGTGTAATTTCAAATGTCACCCTTCGTCAACCTGATTCTTCTGGAGGCACTTTGACCTATGAGGGCCGTTTCGATATACTTTCTTTGTCGGGATCGTTCATGCCTACTGACAACCAAGGAACACGAAGCAGGACGGGTGGGATGAGTGTCTCGTTGGCAAGCCCTGATGGTCGTGTTGTAGGTGGTGGTGTTGCCGGACTTCTAGTAGCCGCTAGTCCGGTGCAGGTGGTGGTGGGAAGTTTCCTGCCAAGCAACCAACAAGATCAGAAACCAAAGAAGCCGAAGCCAACTGATTATTCCACGCCCGTTGTTACTCCCGTTGTTACTCCGGCAGTCATCTCGATGTCTTCTGCACCAAGTCACCCGAGCAATGCTGAGAAAGATGATCATGTGATGGGTGGTGCACACCATGTGATGCAAAACTCATCATCAAACCTTACCCCTTCTCCCTTCAGAAGAGAAAATTGGGTGAACATGCACTCCCTGCAACAAGACTCAAGAAAGTCGGCTACCGACATCAACATATCTTTGCCAGATAGTTAA 1056 0.4953 MEAREGISSGVTVIGAEAPSAYHVAPRSEAPNQVHVPEGGTAAVAAAAAAAAGVSPVSVGIDGSMLKKKRGRPRKYGPDGSVTMALSPLPLSSSGPHSNDFSSGKRGKSKGTEYKQSKKLGFDQLGEYNACADGTNFLPHIITVNAGEDITMKVISFSQQGPRAICILSASGVISNVTLRQPDSSGGTLTYEGRFDILSLSGSFMPTDNQGTRSRTGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLPSNQQDQKPKKPKPTDYSTPVVTPVVTPAVISMSSAPSHPSNAEKDDHVMGGAHHVMQNSSSNLTPSPFRRENWVNMHSLQQDSRKSATDINISLPDS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02942 351 MobiDBLite consensus disorder prediction 65 113 - -
Arst2g02942 351 MobiDBLite consensus disorder prediction 331 351 - -
Arst2g02942 351 MobiDBLite consensus disorder prediction 253 274 - -
Arst2g02942 351 MobiDBLite consensus disorder prediction 86 102 - -
Arst2g02942 351 FunFam AT-hook motif nuclear-localized protein 1-like 139 269 - -
Arst2g02942 351 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 252 IPR005175 -
Arst2g02942 351 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 39 312 IPR039605 GO:0003680
Arst2g02942 351 Gene3D - 139 267 - -
Arst2g02942 351 CDD DUF296 139 229 IPR005175 -
Arst2g02942 351 ProSiteProfiles PPC domain profile profile. 134 276 IPR005175 -
Arst2g02942 351 SUPERFAMILY AF0104/ALDC/Ptd012-like 137 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02942 Arst-Chr2 86962020 86966531 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02942 6 348 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 52.575 1.44e-102 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02942 - - ccaj:109801852 491.886