Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02888 ATGGCTATATACACTTCAATTTTGATGGTATTAATCCAACTTCTCTTGTGTGCCTCCAGCAATTCCTATACCATTTTACCACCTGGAACTCAAAGAAATGCAACATCCAAAGTGTCACCCTTAGATAAAGAAGCCTATGCTTTGTTTTCTCTTCACTGGTGGAGTATCCAATACAATATCTCAAACCGCTGCAACAATTGGCCTGGTGTTGAGTGCAATAACAATGGAAGCATTACAAAGCTTTCACCTCCAAAAGATTCCACCTATACCTTTAAAAGAGACCTGTATATTAGGGACATTGATTTCTCAGTCTTTTCAAATCTTGTCCACCTTGATCTCAGTCAAATGGATCTATATGAACTCCCTTTGGGACTAAGTAGTCTCAAGAAGCTAACATTACTCAACATATCCTCCAACAATCTTCAAGATGAAATCCCTTTCTCATTAGCAAATTTCCCTCAACTTATGGTGTTTGATGTCTCTAACAACCTTTTTACTGGTCAGATTCCACATGAAATTGGCATGTTGGAGAATCTTGTCACATTGGACTTGAGTTTCAACATGTTCAGTGGAACCATTCCGTTGAGTTTGAGTCATGTGACTAGTCTCAACCACTTGAGGATATCCAATAACCAACTAGATGGTGAGCTTCCTTCAACGATTCTAAGTCTTTTTCAGTTGAAGACTGTTGACCTTTCTCGCAATCGTTTTCTTGGTAAGCTCCCTACAACATTTGTAAATAATTCCCAGTTAAGGAATCTAAACCTTTCTGACAATCGAATAGGCGGTTATATCCCTTGTGAAATAGGGAAGTTAGATAATCTGGTGGTTTTAGACCTGAGTTTGAATCAGCTAGCAGGTCCAATTCCTGATCAAATAGGGTGTCTAAAAAATTTGACAAGTCTCCACCTTGATTCAAATTGGATTAATGGTTCTATACCTTCAAGTATAGGACTTTTAACCCATTTGAAAGAGTTGACACTTGGATTCAACCATATAGATGGGTTGATTCCTGCAGAATTAGAGCATTTGGTCCATCTGAAAGTTTTGGATATTTCAAACAATGCAATTTTTGGTAGTATACCAAAATGGATATCTGCATTAACACAATTAACAGATATAAGGCTTCAGGGGAACCAGCTTTGTGGTGTTATCCCATATGGTATCCTTATTCATAGTATTCATGTGGATCTTAGCCGCAACCATTTAAATGGAAGCATTCCTTCTCAAATTGGCTATAATCTTTCATATCTAGACCTTAATCACAATAACTTGAGTGGCAAGAAACCCAAGGAGCTTGAGTCTATTCGATTCTACTATCTATATTGCAATCCCTTTCTTGATGATGGATATTATGACTGCAGCGATTCACAAGATCAAAGAGATTCTGGCCATCATAATCACCATTTCAGTCCATCATCCATAGTTTTGGTTTTGATAATTGTGGCCAGCGTTCTCATTTCTTTTAGCTCCATAGGGATTGGAATTTGTGTTCTCCGTGCCAGGTATCGTCGCAAACACAAAAATAAGGCAGCAAAGCATGGAGATTTATTCTCCATTTGGAACTATGATGGTAAAATTGCATTTGAGGACATCATTGAAGCCACACAGGACTTTGATATCAGATACTGCATTGGAACCGGTGCTTATGGTAGTGTCTACAAAGCGAAACTTCCAAGTGGCAAAACTGTTGCATTGAAGAAGCTTCACAAAACAGAATCAGAAAATCCATCCTATTACAAGAGCTTCTGCAATGAAGTTGAAGTCTTGACAGAGATTCGCCACCGGAACATCATTAGGCTTTATGGCTATTGCTTGCATAACAGATGCATGTTTTTGGTGTATGAATACTTGGAAAGAGGAAGCTTGTTCTGTAACTTGGCCGATGAGATTGAAGCTCAAGAGTTGAATTGGAGGAAGAGGGTGAACATCATTAAAGGGACAGCATATGCTCTTGCTCACATGCATCATCATTGTACTCCTCCTATTGTTCATCGAGATGTCAGCAGCAACAATATTTTGCTCAATTCAGAGTTAGAAGTTTGTGTATCAGATTTTGGCACTGCAAGACTTCTTGATCCTGATTCATCTAATCAAACTCTTCTAGTTGGCACCTATGGATATGTTGCTCCAGAATTGGCATACACCATGTGTGTGACTACAAAGTGTGATGTTTACAGTTTTGGAGTGGTGGCTTTAGAAACAATGATGGGGCATCATCCAGGAGAATTCATTTCCACTCTGACAAAGCCATCTACTCAACAATTATTGGTGAAAGATGTGTTGGATCCACGGATTCCACTTCCGAAATCTCGGAAAGATATGCAAGATGTTGTGCATGTTGTAAAGCTAGCATTAGCATGCCTCTCCTCTGATCCAAAATCCAGACCATCAATGCAAGTTGTGGCCAATGAGTTTTTGGTTTCTAAGGCACCAATACATGTCTCTTTCTCTGATGTCTCAATGTACCAATTGATGAATCAAGAAGTATATGTCATAGATAAAAATTAG 2511 0.3875 MAIYTSILMVLIQLLLCASSNSYTILPPGTQRNATSKVSPLDKEAYALFSLHWWSIQYNISNRCNNWPGVECNNNGSITKLSPPKDSTYTFKRDLYIRDIDFSVFSNLVHLDLSQMDLYELPLGLSSLKKLTLLNISSNNLQDEIPFSLANFPQLMVFDVSNNLFTGQIPHEIGMLENLVTLDLSFNMFSGTIPLSLSHVTSLNHLRISNNQLDGELPSTILSLFQLKTVDLSRNRFLGKLPTTFVNNSQLRNLNLSDNRIGGYIPCEIGKLDNLVVLDLSLNQLAGPIPDQIGCLKNLTSLHLDSNWINGSIPSSIGLLTHLKELTLGFNHIDGLIPAELEHLVHLKVLDISNNAIFGSIPKWISALTQLTDIRLQGNQLCGVIPYGILIHSIHVDLSRNHLNGSIPSQIGYNLSYLDLNHNNLSGKKPKELESIRFYYLYCNPFLDDGYYDCSDSQDQRDSGHHNHHFSPSSIVLVLIIVASVLISFSSIGIGICVLRARYRRKHKNKAAKHGDLFSIWNYDGKIAFEDIIEATQDFDIRYCIGTGAYGSVYKAKLPSGKTVALKKLHKTESENPSYYKSFCNEVEVLTEIRHRNIIRLYGYCLHNRCMFLVYEYLERGSLFCNLADEIEAQELNWRKRVNIIKGTAYALAHMHHHCTPPIVHRDVSSNNILLNSELEVCVSDFGTARLLDPDSSNQTLLVGTYGYVAPELAYTMCVTTKCDVYSFGVVALETMMGHHPGEFISTLTKPSTQQLLVKDVLDPRIPLPKSRKDMQDVVHVVKLALACLSSDPKSRPSMQVVANEFLVSKAPIHVSFSDVSMYQLMNQEVYVIDKN 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02888 836 Gene3D Ribonuclease Inhibitor 41 192 IPR032675 -
Arst2g02888 836 Gene3D Ribonuclease Inhibitor 193 288 IPR032675 -
Arst2g02888 836 Gene3D Ribonuclease Inhibitor 289 390 IPR032675 -
Arst2g02888 836 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 100 192 - -
Arst2g02888 836 Gene3D Ribonuclease Inhibitor 391 441 IPR032675 -
Arst2g02888 836 Pfam Leucine rich repeat 322 381 IPR001611 GO:0005515
Arst2g02888 836 ProSiteProfiles Protein kinase domain profile. 539 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g02888 836 ProSitePatterns Tyrosine protein kinases specific active-site signature. 663 675 IPR008266 GO:0004672|GO:0006468
Arst2g02888 836 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 220 439 - -
Arst2g02888 836 FunFam MDIS1-interacting receptor like kinase 2 618 812 - -
Arst2g02888 836 FunFam Leucine-rich repeat receptor protein kinase MSP1 502 617 - -
Arst2g02888 836 SMART LRR_typ_2 344 368 IPR003591 -
Arst2g02888 836 SMART LRR_typ_2 272 296 IPR003591 -
Arst2g02888 836 SMART LRR_typ_2 320 343 IPR003591 -
Arst2g02888 836 SMART LRR_typ_2 105 128 IPR003591 -
Arst2g02888 836 SMART LRR_typ_2 176 199 IPR003591 -
Arst2g02888 836 SMART LRR_typ_2 200 224 IPR003591 -
Arst2g02888 836 Pfam Protein kinase domain 544 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g02888 836 Gene3D Transferase(Phosphotransferase) domain 1 618 816 - -
Arst2g02888 836 SUPERFAMILY Protein kinase-like (PK-like) 524 804 IPR011009 -
Arst2g02888 836 SUPERFAMILY L domain-like 65 432 - -
Arst2g02888 836 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 239 807 - -
Arst2g02888 836 Gene3D Phosphorylase Kinase; domain 1 499 617 - -
Arst2g02888 836 ProSitePatterns Protein kinases ATP-binding region signature. 545 567 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02888 Arst-Chr2 86313021 86315663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02888 95 711 Receptor kinase-like Gene Family AT4G08850 37.539 2.28e-121 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst2g02888 Pkinase 5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02888 - - aip:110269304 1293.87