Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02884 ATGGCTATATCATGCACTTGCATTATTATTTTGACGTTAGTGCCACTTGTCTTTGTTGACATCACCACCGATGCTGGAACTCACAAATTGTCAGCCTTAGATGAAGAAGCCAATGCTATGCTTTCAATTAGTAAAGAGTTGTGGAGTAACCAATATAATAATGTCTCAAACCGTTGCAACTGGCCCGGAGTTAACTGTAACAAAGCTGGAAGTATAACATTGCTTTCACCTCCAATTCCAAGAAATTTCACCGACGAGTTCAGCACACAAATCTGCTTATTGAAACTAAACTTTTCAGTGTTTCAAAATCTAGTCCATCTAGATCTCAGTGAAATCGGGTTATGTGAGTTTCCTAAACTAAGTGGTCTCAAGAAGCTACAACATCTCAACCTATCATACAACACTTTTGAAGGTGAGCTTCCTTTTACATTATTGGAAAATCTAACTCAACTTCTTGTGTTAGACTTGAGTGCCAACAGGTTCTTTGGAAGCATTCCATTGATTTTTGGTCAAATGAGCAGTCTCACACACATGAATCTTTCCAACAATCTACTAATTGATAAGGTTCCTTTCACATTGACAAATCTAACTCATCTTCTTGTGTTGGACCTTTCGAACAATTATATTAGTGGTACAATTCCACAAGAACTAAGCAAGCTGGAGAGACTTGTCATGTTGGACTTGAGTGGCAACAGCTTCAATGGAAGCATTCCATTGATCTTGGGTCAAATGAGCAGTCTCACACACATGAAACTTTCCAACAATCTACTAGTTGGTGAGGTTCCTTTCACATTGCCAAATCTAATTCAACTTCTTGTATTGGACCTTTCCCAAAACAAACTTAGTGGCTTCATTCCTCATGAAATAGGGAAATTAACAAATTTATTAACCTTTGACCTGAGTTCAAATTTCCTGTCTGCTCCAATTCCTGAGCAAATTGGATACTTGAAGCGTTTGACAAGTCTCCACCTTCATTCAGATTTGCTTAGTGGTTTCATTCCTCGTGAAATAGGGAAATTAACAAATTTAGTAACCTTAAACCTGAGTTCAAATTCCCTGTCTGGTCTAATTCCTGAACAAATCGGGTACTTGACCCATTTGGAAGTGCTCACCATCGGATCCAACAGGATAGATGGTTGTATCCCCAAAGAAATAGAGCATTTGTTGCATCTAAAAGTTTTAGATCTGTCTAGTAATGCAATTTCTGGTGTTATCCCATATTCTCTCTTTATTCACTCTAGTTATATTGACCTAAGCAATAACAGATTAAGTGGAAGCATTCCTTCTCAAATTGGAAACGTTTCATATTTAGACCTTCGTTACAATAACCTTAGTATCAAAAATACAAAGGAACTTGAGTCTCTTATTCCATTCTGTTATATATGTTGCAATCGCTTTCTTGATAATGATGAATATTATGACTGGGATGATCAATTAGACGACCATCATAACAAGCATTTTGGTCGATCATTGGTTTTGGTCATAATCGTGGTCTGCATTACCATTTCATTGGGTTCTGTTGGGATTGGAATATGTATTTTCCGTGCCAGGCATCATGACAAGCTTGAAAATAAGGCCACAAAAAATGGAGACTTGTTCTCAATTTGGAACTATGATGGCCAAATTGCATTTGAGGACATCATTGAAGCAACAGAGAACTTTGATATCAGATATTGCATTGGAACCGGCGCTTATGGTAGCGTCTACGAAGCGCGACTTCCAAGTGGCAAAACTGTTGCATTGAAGAAGCTTCACAAAACAGAATCAGAAAATCCATCCTATTACAAGAGCTTCTGCAATGAAGTTGAGGTCTTGACAGAGATTCGCCACCGCAACATCATTAGGCTTTATGGTTATTGTTTGCATAACAGATGCATGTTTTTGGTGTATGAATACTTGGAAAGAGGAAGCTTGTTTTGTATCTTGGCGGATGAGATGGAAGCACAAGAGTTGAAGTGGAGCAAGAGGGTGAATATCATCAAAGGGACAGCTTATGCTCTTGCTCACATGCATCATCACTGTCCTTCTCCTATTGTTCATCGAGATGTCAGCAGCAACAATGTTCTGCTAAATTCAGAGTTAGAAGCTTGTGTCTCAGATTTCGGCACAGCGAGACTTCTTGATCCTGATTCATCTAACCAAACTCTTTTAGTTGGCACTTATGGATACATTGCTCCAGAATTGGCATACACCATGAGTGTGACTACAAAATGTGATGTTTATAGTTTCGGAGTGGTGGCATTAGAAACAATGATGGGTCATCACCCAGGAGAATTCATGTCCATTATGTCAAAGCCATCTACTCAACAATTATTGGTGAAAGATGTGTTGGATCCGCGGATTCCACTTCCGAAATCTCAGAAAGATATGAAAGATGTTGTGCATGTTGTAAAGCTAGCATTAGCATGCCTCTCTTCTGACCCAAAATCCAGACCATCAATGCAGGATGTGGCTAATGAGTTTTCAGTTTCCAAGGCTTCAATGAATTCTTCTTTTTTTGATGTCTCAATCTACCAATTGATGCATTAG 2529 0.3867 MAISCTCIIILTLVPLVFVDITTDAGTHKLSALDEEANAMLSISKELWSNQYNNVSNRCNWPGVNCNKAGSITLLSPPIPRNFTDEFSTQICLLKLNFSVFQNLVHLDLSEIGLCEFPKLSGLKKLQHLNLSYNTFEGELPFTLLENLTQLLVLDLSANRFFGSIPLIFGQMSSLTHMNLSNNLLIDKVPFTLTNLTHLLVLDLSNNYISGTIPQELSKLERLVMLDLSGNSFNGSIPLILGQMSSLTHMKLSNNLLVGEVPFTLPNLIQLLVLDLSQNKLSGFIPHEIGKLTNLLTFDLSSNFLSAPIPEQIGYLKRLTSLHLHSDLLSGFIPREIGKLTNLVTLNLSSNSLSGLIPEQIGYLTHLEVLTIGSNRIDGCIPKEIEHLLHLKVLDLSSNAISGVIPYSLFIHSSYIDLSNNRLSGSIPSQIGNVSYLDLRYNNLSIKNTKELESLIPFCYICCNRFLDNDEYYDWDDQLDDHHNKHFGRSLVLVIIVVCITISLGSVGIGICIFRARHHDKLENKATKNGDLFSIWNYDGQIAFEDIIEATENFDIRYCIGTGAYGSVYEARLPSGKTVALKKLHKTESENPSYYKSFCNEVEVLTEIRHRNIIRLYGYCLHNRCMFLVYEYLERGSLFCILADEMEAQELKWSKRVNIIKGTAYALAHMHHHCPSPIVHRDVSSNNVLLNSELEACVSDFGTARLLDPDSSNQTLLVGTYGYIAPELAYTMSVTTKCDVYSFGVVALETMMGHHPGEFMSIMSKPSTQQLLVKDVLDPRIPLPKSQKDMKDVVHVVKLALACLSSDPKSRPSMQDVANEFSVSKASMNSSFFDVSIYQLMH 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02884 842 Pfam Leucine rich repeat 318 377 IPR001611 GO:0005515
Arst2g02884 842 Pfam Leucine rich repeat 174 232 IPR001611 GO:0005515
Arst2g02884 842 ProSiteProfiles Protein kinase domain profile. 554 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g02884 842 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 267 822 - -
Arst2g02884 842 ProSitePatterns Tyrosine protein kinases specific active-site signature. 678 690 IPR008266 GO:0004672|GO:0006468
Arst2g02884 842 FunFam Leucine-rich repeat receptor protein kinase MSP1 517 632 - -
Arst2g02884 842 SMART LRR_typ_2 196 220 IPR003591 -
Arst2g02884 842 SMART LRR_typ_2 388 412 IPR003591 -
Arst2g02884 842 SMART LRR_typ_2 148 171 IPR003591 -
Arst2g02884 842 SMART LRR_typ_2 268 292 IPR003591 -
Arst2g02884 842 SMART LRR_typ_2 364 387 IPR003591 -
Arst2g02884 842 SMART LRR_typ_2 340 363 IPR003591 -
Arst2g02884 842 SMART LRR_typ_2 123 147 IPR003591 -
Arst2g02884 842 Gene3D Ribonuclease Inhibitor 311 469 IPR032675 -
Arst2g02884 842 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 88 306 - -
Arst2g02884 842 SUPERFAMILY RNI-like 190 456 - -
Arst2g02884 842 PRINTS Leucine-rich repeat signature 271 284 - -
Arst2g02884 842 PRINTS Leucine-rich repeat signature 340 353 - -
Arst2g02884 842 FunFam MDIS1-interacting receptor like kinase 2 633 827 - -
Arst2g02884 842 FunFam Piriformospora indica-insensitive protein 2 309 407 - -
Arst2g02884 842 Gene3D Ribonuclease Inhibitor 32 310 IPR032675 -
Arst2g02884 842 Gene3D Phosphorylase Kinase; domain 1 515 632 - -
Arst2g02884 842 Gene3D Transferase(Phosphotransferase) domain 1 633 836 - -
Arst2g02884 842 SUPERFAMILY Protein kinase-like (PK-like) 535 819 IPR011009 -
Arst2g02884 842 Pfam Protein kinase domain 559 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g02884 842 ProSitePatterns Protein kinases ATP-binding region signature. 560 582 IPR017441 GO:0005524
Arst2g02884 842 SUPERFAMILY L domain-like 58 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02884 Arst-Chr2 86268331 86271103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02884 120 726 Receptor kinase-like Gene Family AT4G08850 36.826 1.07e-119 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst2g02884 Pkinase 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02884 - - ahf:112728721 1454.88