LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst2g02879	ATGGCACATGTTTCACCATCAACATCATCATCTTCATTCTTCTACAGCTATACTTATGATGTTTTCCTAAGTTTCAGAGGTAAAGATACAAGAAAAGGCTTCACCGGAAGCCTCTACAATGCATTGCGTCAAAGGGGAATCCACACCTTCATTGATGATGAGGGCCTCAGAGTAGGGGAAGAGATAGCCCCATCACTTCTAAATGTGATTGATGACTCTAGGATTGCCATTGTTGTGTTCTCAAAGGATTATGCTTCCTCAAGTTTTTGTCTCAAAGAACTTGTGAAGATCCTTGAGTGTGCGGATTCAAAGGGTCGCCTAGTTTTGCCTGTTTTCTATGATGTGGATCCTTCTGATGTGAGATATCAAAATGGCAGCTATGGAGTAGCGTTGGCTAAGCATGAAAAGAGGCACAATGTGGAAGAATGGAGAAAAGTTTTGAGTAAAGCTGCAAACTTGTCTGGTTGGCATTTCAAACAAGGGCCTGACTCTGAATATGAATATGTGTTTATCAACAAGATTGTTGAAGAAGTCTCCAATAATCTCAAACGAGTTCCTCTACACATTGCGGATTACCCTGTTGGGCTGCAACCTCGGGTTCAAGAAGTGACTAAACTTCTACGCATTGGGGTTGATGATGACAAGGTCAAGATGGTTGGCATTCATGGGATTGGTGGAATAGGCAAAACAACAATTGCTTGTGCTTTATATAACTCCATTGCTGATCGGTTTGAAGCCTCCTGCTTCCTGTCTAATGTTAGAGAAAAAGCAAGCAAGAATGGTTTGGTATCACTCCAAGAGTCACTACTTCTTGAATTGGTTGGGGAGGATGTTAAGTTGGGAGGTGTGAATCATGGAATTCCAATTATAAAAAGGAGGCTCAACCAAAAGAAAGTGTTGCTGGTTCTTGATGATGTTGACAACTTGCAGCAGTTACGAGCTATAGCCGGAGGGACTGATTGGTTTGGTTCTGGTAGCAGAGTCGTCATAACAACAAGGGATAAACATTTGCTACGTTCGCATATAGACGTGAAAGTAAAATCATATGGGATCAAGGAGTTAAATAAGGTAGAAGCTCTTGAACTGTTAAGTTGGAATGCTTTTAAAGGAAACAAAGTTGATCCAAGTTATGCAGACCTTTTGAATCGTGCTATACGCTATGCAAATGGGCTTCCATTGGCATTGACAATAATCGGTTCAAACTTGTTAGGGAAAAGCCTAGATGAATGGGAATCGGCATTGCAAAATTATGAACAAAGGCCAAACAGAAGTATTCAGGAAATGCTTACTGTCAGCTATGAAGGTTTGGAGGATATCCAGAAGGAAATTTTCCTTGACATTGCTTGTTTCTTTGTTGGTGAGAAGTTGGAATATGTGAACAACATGTTAATGCACGGCCGCAGCTTCAACCCCGAGTATGGTATAGGAGTTTTGATTCAGAAATCTCTCTTAATGGACAAATATGGTCATGCAGCAATGCATGACTTGGTAACAGAAATGGGGAGAGAAATTGTGAGGAAAGAATCAGAGGTAGAGCCTGGCAACCGCAGTAGGCTATGGTTCTATGAAGATATTATTCATGTTTTAGAAGAAGACATGGGATCTGAGAAAACAGAAATCATGATCATAGATTTGCCTGAAGATGAAGAAGTGTATTGGACAGGAGAAGAATTTAAGAAGATGAAAAACCTCAAAATACTTAAAGTCACAAATGCAAAGTTCTCCACAGGTCCCAAGCATCTCCCAAATACCTTAAGAGTGCTCGATTGGGAAGGATATCCATCACCATGCTTACCACCGGATTTTCGTCCACGGAAACTCAGCATGATGAACTTGCCTAACAGTTCCCTCAAGTTGGATAATCCCCTGAAGAACTTTAGGAGTTTGAGTCACATGAATTTTGAAGGTTGTGAAACATTAGTACAACTACCTGACATATCTGGAGTCCCAAATTTGACAGAACTTTGCCTTGATGATTGCAAAAATTTGGTTGAAGTCCATGATTCAATTGGATTTCTTCATAAACTCAGGAAGTTGAGTGTTAAAGGATGCACTAGCCTCAGCACATTTCCTCATAGCATCAACTTGACATCTCTTGAAACACTCTCTTTGTGGGGATGCTCAAGTCTTAGAAACTTTCCAGAAATTTTAGGAAAGATGGAGTTTCTAGAAGGTGTTGATTTGGGATCAAGTGCGATTGAAGCGCTTCCTCATTCAATTCAAAATCTAGTAGGCCTTAGATGGCTCGACTTGATCAGTTGCAACTGGCTTAGTCAATTGCCAAGTAGCATTTTCTTGTTGCCGAAACTCGAGTCATTGGAAGCTGAATATTGTAAAGGGTGTCAAATATTAATCAATTATGAAGGACAAGAAAATATGGGCAGCATAGTCTCTTCAAAAGTGAAGGATCTTCACTTTAGATCTTGCAATGTATCCGATGAATTTCTTCCTATTTATTTCACTTGCTTTCCCAACATAGAAATGTTACATTTGGGCGCAAATAACTTCACAACCCTTCCTTCCTGCATCAAAGACTGTCGCTTTTTAACGAGCGTCTGCTTGGACAATTGCAAGCAACTTCAACACATCACAGCACTTCCACCAAACATCAAAACTTTATCAGCAAGGAACTGCATATCCTTGACTTCACACTCTACAAGCATGTTATTGAGTCAGGAAATACATGAAGTTGGAGGGACACACTTTATGTTTCCAGGAACAAATATTCCAGATTGGTTTGACCAACACAAGGAGGGAGCCTCACTGTCTTTCTGGTTTCGAAAGAAATTCCCAGAAATCGCGCTTTGTTTTGTTTTCGGAGGCTTGGACAAGGAACCTAGGAAATTTGAGGTCAAGCTCCATGTGTTCATCAATGGCAAGCCATCATTCTATTCCAATGAAGGCAACAGCTTCAAAATGCTGACGGATCACGTGTTCCTATTCGACCTGCAGAAGGAAGTGGAGCTTCCTTCTTACCAACTTGACCAAGTAGTTCTTGAAAATGAATGGAATCATGTTGAGATTCATTGTTTGCATAGTCCAACAGTATTAGAATCATCCCTTGATATGGCCATTGTGAAATGGAGTGGTGTTCATGTGTACAAGCAGGGAAATAACATGGATGATGTTTCATTTTGTAATCCTCAACACAGAACATATGATTTGGTAGCTCGTTATCCGTGGATCAAGAACCAGTTTGCACTCTCAAATGAGACCTCAGATTCCAATGCAATGGTGATGAGAACCATTGGCATGACTAGTGAAAATGCTAAGAGTCTTGAGGGAGAGGATGGAAGTGGAAGTTGA	3306	0.4059	MAHVSPSTSSSSFFYSYTYDVFLSFRGKDTRKGFTGSLYNALRQRGIHTFIDDEGLRVGEEIAPSLLNVIDDSRIAIVVFSKDYASSSFCLKELVKILECADSKGRLVLPVFYDVDPSDVRYQNGSYGVALAKHEKRHNVEEWRKVLSKAANLSGWHFKQGPDSEYEYVFINKIVEEVSNNLKRVPLHIADYPVGLQPRVQEVTKLLRIGVDDDKVKMVGIHGIGGIGKTTIACALYNSIADRFEASCFLSNVREKASKNGLVSLQESLLLELVGEDVKLGGVNHGIPIIKRRLNQKKVLLVLDDVDNLQQLRAIAGGTDWFGSGSRVVITTRDKHLLRSHIDVKVKSYGIKELNKVEALELLSWNAFKGNKVDPSYADLLNRAIRYANGLPLALTIIGSNLLGKSLDEWESALQNYEQRPNRSIQEMLTVSYEGLEDIQKEIFLDIACFFVGEKLEYVNNMLMHGRSFNPEYGIGVLIQKSLLMDKYGHAAMHDLVTEMGREIVRKESEVEPGNRSRLWFYEDIIHVLEEDMGSEKTEIMIIDLPEDEEVYWTGEEFKKMKNLKILKVTNAKFSTGPKHLPNTLRVLDWEGYPSPCLPPDFRPRKLSMMNLPNSSLKLDNPLKNFRSLSHMNFEGCETLVQLPDISGVPNLTELCLDDCKNLVEVHDSIGFLHKLRKLSVKGCTSLSTFPHSINLTSLETLSLWGCSSLRNFPEILGKMEFLEGVDLGSSAIEALPHSIQNLVGLRWLDLISCNWLSQLPSSIFLLPKLESLEAEYCKGCQILINYEGQENMGSIVSSKVKDLHFRSCNVSDEFLPIYFTCFPNIEMLHLGANNFTTLPSCIKDCRFLTSVCLDNCKQLQHITALPPNIKTLSARNCISLTSHSTSMLLSQEIHEVGGTHFMFPGTNIPDWFDQHKEGASLSFWFRKKFPEIALCFVFGGLDKEPRKFEVKLHVFINGKPSFYSNEGNSFKMLTDHVFLFDLQKEVELPSYQLDQVVLENEWNHVEIHCLHSPTVLESSLDMAIVKWSGVHVYKQGNNMDDVSFCNPQHRTYDLVARYPWIKNQFALSNETSDSNAMVMRTIGMTSENAKSLEGEDGSGS	1101

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst2g02879	1101	PRINTS	Disease resistance protein signature	694	710	-	-
	Arst2g02879	1101	PRINTS	Disease resistance protein signature	218	233	-	-
	Arst2g02879	1101	PRINTS	Disease resistance protein signature	293	307	-	-
	Arst2g02879	1101	PRINTS	Disease resistance protein signature	388	402	-	-
	Arst2g02879	1101	Pfam	NB-ARC domain	211	435	IPR002182	GO:0043531
	Arst2g02879	1101	SUPERFAMILY	L domain-like	538	899	-	-
	Arst2g02879	1101	Gene3D	Ribonuclease Inhibitor	711	897	IPR032675	-
	Arst2g02879	1101	SUPERFAMILY	Toll/Interleukin receptor TIR domain	8	156	IPR035897	-
	Arst2g02879	1101	Gene3D	-	353	437	IPR042197	-
	Arst2g02879	1101	Gene3D	-	183	347	IPR027417	-
	Arst2g02879	1101	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	180	447	IPR027417	-
	Arst2g02879	1101	SMART	till_3	18	153	IPR000157	GO:0007165
	Arst2g02879	1101	Gene3D	Ribonuclease Inhibitor	541	710	IPR032675	-
	Arst2g02879	1101	Pfam	TIR domain	19	186	IPR000157	GO:0007165
	Arst2g02879	1101	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	19	716	IPR044974	GO:0006952
	Arst2g02879	1101	SUPERFAMILY	"Winged helix" DNA-binding domain	424	530	IPR036390	-
	Arst2g02879	1101	Gene3D	-	16	182	IPR035897	-
	Arst2g02879	1101	ProSiteProfiles	TIR domain profile.	17	182	IPR000157	GO:0007165
	Arst2g02879	1101	FunFam	Disease resistance protein (TIR-NBS-LRR class)	15	184	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst2g02879	Arst-Chr2	86248498	86253080	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst2g02879	13	778	WRKY Transcription Factor Family	AT4G12020	30.468	8.51e-81	288

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst2g02879	-		-	adu:107475516	2170.2