Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02850 ATGGCCAATTTTTCCATACTAGTCTTTCTCCTTCTTCTCTTCACCACCAACACTTTCTCCCTCCAACAAGAAATAGAGCTACTAAAAATGACCCAAACCCAAGTTTCACAAATCATGAACAATTTGTTAGGGAAACTTGGAAATGAAGCCATGCTAGTTGTTGATGATCATTCACACCAAAATTATTCAAGTACCAGTGTGGCTCTAAGAGATTGTGCTAATCTCTATGAGGAGAGTGAGTATAGGCTTTCTTACATGATGAACTCAATGAATAGTAGCTATTATTATTATGACAATGATGATGCACTTTCTTGGGTTAGTGCTTTGATGACAAACCACGAAACTTGTTTGGATGGATTGAAGGAAAAAGGGTATGTTGGTGCTCATGATGAGGTTTTGGAAAATGGAAACTTGACCATGTTGCTTGGCCAAGCTCTTGATTTGTATGCTAAGAGAAAAGGCAAAGCAAAACCAAAAGCAGAGAGAGCATTTTCCAGATCATCAAGTAATGGTGGAATAATGTTAGCATCATGGAATCCATCAACATCGAAAGCAGACTTCATAGTATCACAAGATGGGTCAGGAACACACAGAACAATAAGAGATGCAGTGGAAGCACTTGCTTCAAGGGGTAGCAAGAATGAAGAAAGAAGAATTATTTATGTTAGAGCAGGTGTGTACCATGAGAAGGTTGTGATTGGACCCAAATTGCAGAATGTGATGTTTGTTGGAGATGGCATGGACAGAACCATTGTCACTGGAAGCAGAAGTGCTGCTGATGGTTCTTCTACTCTTGGTTCAGCCACATTTGATATATCTGGAGATGGATTTTGGGCAAGAGACATGACATTTGAAAACACAGCAGGACCAAGAAAGCACCAAGCAGTAGCACTAAAATCAGGTTCAGATTTTTCAGTTTTCTACAGATGCAGATTCAGAGGATACCAAGACACACTCTATGTCTATGCTAACCGCCAATTCTACCGAGATTGCCAAATCTATGGAACCATAGACTTCATCTTCGGAGATGCCACAGTTGTCATTCAAAACAGTGACATCTATGTGAGAAAACCAATGTCGTCCCAATCAAACTATATAACAGCACAAGGGAGAGAAAATCCTAAAAAACCAACTGGGATTTCAATAATCAATTGCAAGGTTAGGCCAACAAGTGATTTTGTTACATCTGAGAGTTCAATCAAGACATTCTTGGGTAGGCCTTGGAAGAAGTATTCTAGGACTGTGGTGATGAAGAGTGATTTGGATGGTTTGATTGATCCGAAAGGGTGGGGGCCATGGGACGGTGAATTTGCAATTAGGACTTTGTATTATGGTGAGTATATGAATTATGGGAGTGGTGCTTCTTTAAGGAATAGGGTTAATTGGCCTGGCTTTCATGTTTTGAATAGTGCTAATGAGGCTTCTCCTTTTAGTGTTGGTGAGTTCTTGCAAGGTGGTAGGTGGATTCCAGCTTCTGGGGTTCCATTTTCCTCTGGGATCTAA 1503 0.4032 MANFSILVFLLLLFTTNTFSLQQEIELLKMTQTQVSQIMNNLLGKLGNEAMLVVDDHSHQNYSSTSVALRDCANLYEESEYRLSYMMNSMNSSYYYYDNDDALSWVSALMTNHETCLDGLKEKGYVGAHDEVLENGNLTMLLGQALDLYAKRKGKAKPKAERAFSRSSSNGGIMLASWNPSTSKADFIVSQDGSGTHRTIRDAVEALASRGSKNEERRIIYVRAGVYHEKVVIGPKLQNVMFVGDGMDRTIVTGSRSAADGSSTLGSATFDISGDGFWARDMTFENTAGPRKHQAVALKSGSDFSVFYRCRFRGYQDTLYVYANRQFYRDCQIYGTIDFIFGDATVVIQNSDIYVRKPMSSQSNYITAQGRENPKKPTGISIINCKVRPTSDFVTSESSIKTFLGRPWKKYSRTVVMKSDLDGLIDPKGWGPWDGEFAIRTLYYGEYMNYGSGASLRNRVNWPGFHVLNSANEASPFSVGEFLQGGRWIPASGVPFSSGI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02850 500 Gene3D - 180 500 IPR012334 -
Arst2g02850 500 SUPERFAMILY Pectin lyase-like 181 499 IPR011050 -
Arst2g02850 500 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 132 IPR035513 -
Arst2g02850 500 PANTHER PECTINESTERASE 32 490 - -
Arst2g02850 500 Pfam Pectinesterase 186 485 IPR000070 GO:0030599|GO:0042545
Arst2g02850 500 FunFam Pectinesterase 180 500 - -
Arst2g02850 500 Pfam Plant invertase/pectin methylesterase inhibitor 54 147 IPR006501 GO:0004857
Arst2g02850 500 ProSitePatterns Pectinesterase signature 2. 333 342 IPR033131 -
Arst2g02850 500 Gene3D Invertase/pectin methylesterase inhibitor family protein 19 151 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02850 Arst-Chr2 86000996 86006324 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02850 7 500 Carbohydrate Esterase AT3G60730 48.566 3.06e-178 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02850 K01051 - gmx:100792852 609.372