Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02841 ATGGCAGCAATGGGTTTATTATTCTCCAATTTTCTCATTGTTCTCTTCTTTCTAACAACATTTGCTTATGGTTATTCTTCAAATGATGTTAAACATTGGTGTAGCCAAACCCCAAACCCTCAACCATGTGAGTATTTCTTGAGCAATAACCCTAATCACTTTCACAAACCCATTAAGCACAAAGGAGATTTTCTCAAGCTTTTATTGCAACTTGCTCAAGAGAGAGCACTCATAGGCCATGCAAACACTGTTTCACTTGGATCAACTCTTTCACTTCACTCAAAGTGCCACAACCAACTTGAAAGAGTTGCATGGAATGATTGTGTTAAGCTCTATCAACTGACCATTCATAAGCTCAACAAAATCCTAGATCCTAACACCAAGTGCTCCAAAGTTGATGCTCAAACATGGCTTAGCACTGCACTCACAAACCTTGAGACATGCAAAGCTGGCTTCTATGAACTTGGTGTTCAAGACTCTCTTCTTCCTCTAATGTCCCACAATAATCTTACTAAGTTGCTAAGCAACCTTTTGGCTCTTAATAACAAGGGTGAATCCCATCAAGAGCCAAGTTACAAAGATGGATTCCCAACATGGGTCAAGCCTGGTGATAAAAAATTGCTACAAGCATCTTCTCCAGCATCTCAAGCCAATGTGGTGGTGGCCAAAGACGGATCTGGAAAATACACAACAGTTATGGCAGCCATAAACGGAGCACCAAATTATAACAGTAGAAGGTATGTGATATATGTGAAGGCCGGGGTTTACAACGAACAAGTTGAAATAGAGGCAAATAATATAATGTTGATCGGAGATGGTATCGGAAAAACCATAATCACCGGCAGCCAAAGTGTTGGTGGAGGCAGCACAACCTTTAATTCATCCACTGTTGGTATTACGGGAGAAGGATGTATTGCTCAAGGAATCACATTTAGAAACACTGCAGGTGCAGCAAATCAGCAAGCTGTTGCATTGCGTTCTGGATCTGACTTATCAGTTTTTTATCGATGCAGTTTTGAAGGTTATCAAGACACATTATTAACTTTATCTGACAGACAATTCTATAGAGAATGTGACATTTATGGAACTGTTGACTTTATTTTTGGTAATGCTATTGTGGTGTTTCAAAATTGCAACATATTTGTAAGAAAGTATCCAGAAACAACGAACACAATCACTGCACAAGGAAGAATTGATGCAAAACAAAACACTGGATTTTCCTTTATCAATTGTGTGGTTACAGTTGCACCAGATTTGAAAGCAGTTCAAAGCTCTATGAAGGCATATCTTGGAAGGCCATGGCAAAAATATTCAAGAACAGTTTTCATGAAGAGTTATTTTGATAGCTTGATTGTTCCAGCAGGTTGGTTGGAATGGAATGGTGACTTTGCATTAAGTACTTTGTATTATGGAGAATACATGAACACAGGTCCTGGATCTTCAACCACAAACAGAGTTAAATGGGGTGGTTATCATGTCATAACCAATGCTGCTGAAGCTTCAAACTTCACCGTTTCAAACTTCATTGCTGGCAACTCATGGCTACCATCCACCGGTGTGCCTTTCACCGCTGGTCTCTAG 1581 0.3966 MAAMGLLFSNFLIVLFFLTTFAYGYSSNDVKHWCSQTPNPQPCEYFLSNNPNHFHKPIKHKGDFLKLLLQLAQERALIGHANTVSLGSTLSLHSKCHNQLERVAWNDCVKLYQLTIHKLNKILDPNTKCSKVDAQTWLSTALTNLETCKAGFYELGVQDSLLPLMSHNNLTKLLSNLLALNNKGESHQEPSYKDGFPTWVKPGDKKLLQASSPASQANVVVAKDGSGKYTTVMAAINGAPNYNSRRYVIYVKAGVYNEQVEIEANNIMLIGDGIGKTIITGSQSVGGGSTTFNSSTVGITGEGCIAQGITFRNTAGAANQQAVALRSGSDLSVFYRCSFEGYQDTLLTLSDRQFYRECDIYGTVDFIFGNAIVVFQNCNIFVRKYPETTNTITAQGRIDAKQNTGFSFINCVVTVAPDLKAVQSSMKAYLGRPWQKYSRTVFMKSYFDSLIVPAGWLEWNGDFALSTLYYGEYMNTGPGSSTTNRVKWGGYHVITNAAEASNFTVSNFIAGNSWLPSTGVPFTAGL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02841 526 ProSitePatterns Pectinesterase signature 1. 243 262 IPR018040 -
Arst2g02841 526 SMART PMEI_2 25 180 IPR006501 GO:0004857
Arst2g02841 526 CDD PMEI-like_3 33 172 - -
Arst2g02841 526 NCBIfam pectinesterase inhibitor domain 7 183 IPR006501 GO:0004857
Arst2g02841 526 Pfam Pectinesterase 218 512 IPR000070 GO:0030599|GO:0042545
Arst2g02841 526 ProSitePatterns Pectinesterase signature 2. 360 369 IPR033131 -
Arst2g02841 526 FunFam Pectinesterase 212 526 - -
Arst2g02841 526 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 183 IPR035513 -
Arst2g02841 526 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 183 IPR035513 -
Arst2g02841 526 Pfam Plant invertase/pectin methylesterase inhibitor 29 180 IPR006501 GO:0004857
Arst2g02841 526 SUPERFAMILY Pectin lyase-like 212 525 IPR011050 -
Arst2g02841 526 PANTHER PECTINESTERASE 17 516 - -
Arst2g02841 526 Gene3D - 213 526 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02841 Arst-Chr2 85928895 85930781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02841 1 526 Carbohydrate Esterase AT2G45220 60.646 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02841 K01051 - gmx:100781697 750.74