Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02766 CCGCCGCCGCGCCACGCCTCCCCACGCTCAATAAGACAAGAGGTTTCTGTGGCCCTAAATCGCTCAACTGGTTCATCAGGAACACGTGACCATGATTCACCAGATGATAAATCCAAATGGGAATGCGTGAGGAAAGGGGTTTGCTGCATTTGCTGCGAAAGCAATATTGATTCTCTCTTGTACAGATGTGGGCACATGTGCACATGTTCTAACTGTGCTAATGATTTGCACCGAAGTGGAAGGAAGTGTCCAATGTGTCAAGCACCAGTTGTTGAAGTAATTCGTGCTTATTCTATATTATAG 303 0.4653 PPPRHASPRSIRQEVSVALNRSTGSSGTRDHDSPDDKSKWECVRKGVCCICCESNIDSLLYRCGHMCTCSNCANDLHRSGRKCPMCQAPVVEVIRAYSIL 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02766 100 ProSiteProfiles Zinc finger RING-type profile. 48 87 IPR001841 -
Arst2g02766 100 MobiDBLite consensus disorder prediction 19 39 - -
Arst2g02766 100 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 9 100 - -
Arst2g02766 100 SUPERFAMILY RING/U-box 47 93 - -
Arst2g02766 100 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 98 IPR013083 -
Arst2g02766 100 Pfam Zinc finger, C3HC4 type (RING finger) 46 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02766 Arst-Chr2 84508138 84508874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02766 48 95 C3H Transcription Factor Family AT3G06140 37.500 3.09e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02766 - - ahf:112730063 213.386