Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02760 ATGGCTATTTCACCGCAAACTTTCCCTCCCAGAAAACGACGACCCTCAGCAGGGTCGTTTATCTCGCCAAAGCTAAACGACATCAACCTCCTCCACTCCCTCCTCCATCTAACGACACAAATAAGTTCCATAAACCGTTCAACGACACTGCTTCTGCTTAAACGCAGCGCCAATGCTGTCGTTCGCAAGGCGAAGCTACTCGCCGTTCTATTCGAGGACCTAATACGAAATTCCGATTCTGGCCTCGCTTCTTCTTCTTCTTCGTCATCGTTTCTCCTCTGCCTGGAAGAGACATACATCGTTCTGCACCGAATCAAAACCCTAATTGAAGATTGCTCCAACGGAAGCAAGTTCTTCTTCCTCATGCAAATCGAAACCGTCGCCGACAACTTCCACAAACTTACCGGAGAACTCTCCACGCTCCTTGACATCTTCCCGGTACACGACCTAGACCTGAACGACGACGTTCAGGAACTCGTGATTCTAATCAGAAAACACTGCTTGCAATCGAAACCGGTGATAGAGGATTCAGAAAGAGAGCTCCGAAACGAGGTGGTTTCGGTGCTCGAGAGTATCAAGAACGAGATCGTACCTGACCGGAGCAAACTCGCTTCGATCTTCGAGAGGTTGGAGATTCGCGATTCATCGAGCTGCAGGGCAGAGATTGAGTGCTTGGAGGAGGAGATCCAGAATCGGAGCGAGGAGAATTCCAAGTCTGAGATCGTCGCCTTGATCGGTCTCGTTCGCTACGCAAAGTGCGTCCTCTTCGGCGCTTCAACCGCCGCCGCGGCGTCTTCTTCAGTGGAGGTTCAACGGCGGAAACAGCCATCGGAGTTAGTTGTTCCGGCGGACTTCCGGTGTCCTATAAGCCTCGAGCTCATGCGTGATCCCGTCGTCGTGGCGACAGGGCAGACGTACGATCGTGAATCGATCAAGCTCTGGATGGATTCTGGACACAACACGTGTCCAAAAACGGGTCAGACCTTGGCCCACACAGAACTCATACCAAATCGCGCGTTGAGAAAGATGATAGCATTGTGGTGCCGCGAGGAGAAGATTCCCTTCGATGCAGAAACCGTTACCGGAAGGCCTATAAGCCGCGTAACAAACAAGGCCGCGCTTGAAGCCACGCGCATGACGGCGTTGTTTCTGGTCAACAAACTGAAGGTCCCTATAACTAACTCTCAGTCTATGGAGGACTCAAACGCCATCGTTTACGAGCTTCGTTTTCTGGCCAAAACAGACTCGGATAGCCGAGCCTGCATCGCGGAAGCTGGAGCCATCCCGCTTTTGGTTCGGTATCTCAGCTTCGACGTTGGGGTTCATAGTCCAAGCCTGCAGGTTAACGCCGTTACTACGATATTGAACCTTTCAATATTGGAGGCGAACAAAACGAGGATAATGGAGACTGACGGCGCACTTAACGGAGTTGCGGAGGTTTTGCGTTCGGGTGCCACGTGGGAAGCTAAGGCAAATGCAGCGGCCACGGTGTTCAGTTTGTCAGGTGTTCCAGCTTATAGAAAGAGACTTGGAAGGAAGACACGTGTCGTGAATGGATTGGTCCAGTTGGCAAGATGTGGACCCGAGGGACCCAGGAGGGATGCATTGGCGGCAATTCTGAGTTTGGCGGCGGATAGGGAAAGCGTGGCAAAGTTAGTGGAGGGCGGCGCGGTGGAAATGGCAGTGGAGGTGATGGTGGCCGTACCGGAGGAGGCGGCAACTGTGTTGGAGGCCGTGATTAAGCGCGGTGGGTTGGTGGCAGTGGCAGCGGCATACAATGGGATCAAGAGGCTGGGAGCAGTGTTAAGAGAAGGTTCAGAGAGGGCAAGGGAAAGCGCCGTGGCGACATTGGTGACAATGTGCCGGAAAGGGGGGTCGGAAGTGGTGGGGGAGTTGGCGGCCATTCCGGGGGTAGAGAGAGTAATTTGGGAGATAATGGCAGTTGGAAGCGTCCGGGGGAGGAGAAAGGCGGCAACATTATTGAGAATCCTACGCCGGTGGGCGGCCGGGTTAGATGGCGTAGAGATAGAAGGGTTTTCAACAACCACCATGTCTTCCGCAACCACTGTGGTGGTTCCAACTTCCAATTCAGTAGCGCAGTAA 2103 0.533 MAISPQTFPPRKRRPSAGSFISPKLNDINLLHSLLHLTTQISSINRSTTLLLLKRSANAVVRKAKLLAVLFEDLIRNSDSGLASSSSSSSFLLCLEETYIVLHRIKTLIEDCSNGSKFFFLMQIETVADNFHKLTGELSTLLDIFPVHDLDLNDDVQELVILIRKHCLQSKPVIEDSERELRNEVVSVLESIKNEIVPDRSKLASIFERLEIRDSSSCRAEIECLEEEIQNRSEENSKSEIVALIGLVRYAKCVLFGASTAAAASSSVEVQRRKQPSELVVPADFRCPISLELMRDPVVVATGQTYDRESIKLWMDSGHNTCPKTGQTLAHTELIPNRALRKMIALWCREEKIPFDAETVTGRPISRVTNKAALEATRMTALFLVNKLKVPITNSQSMEDSNAIVYELRFLAKTDSDSRACIAEAGAIPLLVRYLSFDVGVHSPSLQVNAVTTILNLSILEANKTRIMETDGALNGVAEVLRSGATWEAKANAAATVFSLSGVPAYRKRLGRKTRVVNGLVQLARCGPEGPRRDALAAILSLAADRESVAKLVEGGAVEMAVEVMVAVPEEAATVLEAVIKRGGLVAVAAAYNGIKRLGAVLREGSERARESAVATLVTMCRKGGSEVVGELAAIPGVERVIWEIMAVGSVRGRRKAATLLRILRRWAAGLDGVEIEGFSTTTMSSATTVVVPTSNSVAQ 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02760 700 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 263 357 IPR013083 -
Arst2g02760 700 Pfam U-box domain 281 352 IPR003613 GO:0004842|GO:0016567
Arst2g02760 700 SMART Ubox_2 284 347 IPR003613 GO:0004842|GO:0016567
Arst2g02760 700 Pfam Armadillo/beta-catenin-like repeat 416 458 IPR000225 GO:0005515
Arst2g02760 700 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 426 472 IPR000225 GO:0005515
Arst2g02760 700 FunFam RING-type E3 ubiquitin transferase 278 354 - -
Arst2g02760 700 FunFam RING-type E3 ubiquitin transferase 367 559 - -
Arst2g02760 700 Gene3D - 383 591 IPR011989 -
Arst2g02760 700 Coils Coil 215 242 - -
Arst2g02760 700 PANTHER U BOX DOMAIN-CONTAINING 55 665 - -
Arst2g02760 700 CDD RING-Ubox_PUB 282 334 IPR045210 -
Arst2g02760 700 SUPERFAMILY RING/U-box 280 354 - -
Arst2g02760 700 SUPERFAMILY ARM repeat 392 664 IPR016024 -
Arst2g02760 700 SMART arm_5 415 459 IPR000225 GO:0005515
Arst2g02760 700 ProSiteProfiles U-box domain profile. 280 354 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02760 Arst-Chr2 84343021 84345436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02760 9 698 U-box Gene Family AT5G01830 54.834 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02760 - - tpra:123922727 925.235