Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02685 ATGGGTTCCTCTGAGGAAATGGGTACCTCTGGGAATATGGGTTCCTTTGATGATGCAAGAGTGGATGATGGGATTCGCATGAAGATTGCAGTCTCACTCGTGTCAAAGAATCATAATATGATCAGTTATAAGGTCAAAAGAAATGCCATTGAAAATCTTAATAAGCTGCTTTGGACTCCCATAGATGGTGAATTTGATGACTACATCATTAATCCAAAACCTAGTGGCTATCAGTCCTTGCACACTGCAGTACAAGGTCCTGATAACTCATCCCTTGAAGTACAAATAAGAACACAGAGGATGCATGAGTATGCTAAACATGGAAATGCTGCACATTGGCTGTATAAGGAAACTGGAAATCCTTTGTCATCAATAGACATCATGGATGAACCTGAAACAGAAGAATCCTATTTCTCCAAGGATATAGAAGATGGGAATTCTTCGGATATTTTGTTAAATGTTAAAAAGGATGAAAGAGAATTGTTAGTTGCTGTCAGCTTTGGGCTTGCAGCTTCTGAAGCAGTAGCTGACAGAAGATCTTCTTTCCAGATTAAGCGATGGGAAGCTTATGCACAACAAATTGATGAGAAAGAGGAGGCCCGTGATGAAGATGATGATGGTGATGATGATGTTCAGTGGCAAACGGATACATCTATTGATGCTGCTCGTCAACGTATCCAAGAACAGTTAAGTGCTGTGACTGCTGATATGGTCATGCTCTCGACAAATGAACCAGAGAAGAAGAAGAAGACAGAAAGCAAGGGTTCTGAGAATGGTGACACTGTGAACTATGCAACTGTGGTCAGGAAAGTGAAAGCATATTTGAAAAAAGGTGTTGCAGCGAAGGAATTGCAGTCACATATTGCTGCATTTCCTGTATCTGCTCAGGAGAAGATGAATGCACTTCTTGAAGGATTATTTGATGGTGTCGAAAAAGCGTTTGGAAAAGAAGCTACCAAGAGGAAGAATCACCTTGCTGCTGCAGTTCCTGGAGATGACGAGGGTTTGCAGCTGTTATTGCTCAATGCTGTTGAGGAGTTCTGTTACAAGAAAGGTAGCAATGCATTGAATGAGGTTGCACTTATTCTGAAAGCCCTATATGATGTTGATTTGGTGGAGGAAGAGCACGTCGTGCATTGGTATTCAAAGGGACTGAAGGGTGATAAGAAGGACTCTCAGATATGGAAGAATGCTCAACCATTCATTGATTGGCTTCGGAATGCTGAATCAGAATCGGAGGAAGATGAGAAAAGTTTGTGCTCAGTTCAGAATATTGAAGATTATGATATCACGTTTACTTACTGTTATTGTCCTCAGTTTGATGTATTTTCTTTACTGTTGTATCCTTTTATTTTGAATAAAGGGTCTTGTTTTGGCCCCTTGTGTAGTTGA 1392 0.4059 MGSSEEMGTSGNMGSFDDARVDDGIRMKIAVSLVSKNHNMISYKVKRNAIENLNKLLWTPIDGEFDDYIINPKPSGYQSLHTAVQGPDNSSLEVQIRTQRMHEYAKHGNAAHWLYKETGNPLSSIDIMDEPETEESYFSKDIEDGNSSDILLNVKKDERELLVAVSFGLAASEAVADRRSSFQIKRWEAYAQQIDEKEEARDEDDDGDDDVQWQTDTSIDAARQRIQEQLSAVTADMVMLSTNEPEKKKKTESKGSENGDTVNYATVVRKVKAYLKKGVAAKELQSHIAAFPVSAQEKMNALLEGLFDGVEKAFGKEATKRKNHLAAAVPGDDEGLQLLLLNAVEEFCYKKGSNALNEVALILKALYDVDLVEEEHVVHWYSKGLKGDKKDSQIWKNAQPFIDWLRNAESESEEDEKSLCSVQNIEDYDITFTYCYCPQFDVFSLLLYPFILNKGSCFGPLCS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02685 463 Gene3D - 257 426 - -
Arst2g02685 463 SMART 542_3 322 411 IPR003307 GO:0005515
Arst2g02685 463 Pfam eIF4-gamma/eIF5/eIF2-epsilon 337 415 IPR003307 GO:0005515
Arst2g02685 463 CDD NT_Rel-Spo_like 49 105 IPR007685 GO:0015969
Arst2g02685 463 SUPERFAMILY ARM repeat 263 409 IPR016024 -
Arst2g02685 463 CDD W2_eIF5 267 408 - -
Arst2g02685 463 Gene3D Beta Polymerase, domain 2 8 99 IPR043519 -
Arst2g02685 463 PANTHER GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE 57 282 - -
Arst2g02685 463 ProSiteProfiles W2 domain profile. 254 415 IPR003307 GO:0005515
Arst2g02685 463 SUPERFAMILY Nucleotidyltransferase 57 121 IPR043519 -
Arst2g02685 463 SMART RelA_SpoT_2 25 119 IPR007685 GO:0015969
Arst2g02685 463 Pfam Region found in RelA / SpoT proteins 48 119 IPR007685 GO:0015969
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02685 Arst-Chr2 83116218 83120792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02685 213 408 Eukaryotic Initiation Factors Gene Family AT1G77840 50.490 9.28e-56 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02685 K03262 - aip:107619007 295.049