Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02650 ATGCTGCCTCTCCTTCGATACACCCGTAAGAAGTCAGAGGGTGGGTTGTACATCGACATGTTCACTTTCCTTGCCTTTGGGAAGGACTGTGTGGGTTGGAATTTCGAGAAGACTGGTAACCCTGTTTATTTACATGTAAAGAAGACTAAGAAACTGGTTCCAGAAGACAGGCCTACCAAGAAACCAACCCGCTTGGCGATAGGGGTTGAAGGGGGATTCGACAACAATGAACCCGAATATGAAGAAACTCATACTATAGTCATTTTACCAAACTATATATCTCTTCCATTCCCATCTGTTGAATTGCCAGAGAAGGTAAGGTTGGCTGCAGATGCTATAGTACTAGCTGAGGGTGCTGAACGGAAGGAGCAGGTTGCAGCTTGGACTGCTGATAAGAAAACAGTTAGTACCTATGCAATGAATTTACAGCAACTTGACAATGGTGTTGTCATTCCTCCGTCTGGTTGGAAATGTGCCAAGTGTGACAAGACGGATAATCTTTGGCTAAATCTGACTGATGGGATGATTCTTTGTGGGAGGCGAAATTGGGATGGAAGTGGTGGAAACAACCATGCTGTTGAGCATTACAATGAGACAGGCTACCCTCTTGCTGTAAAGCTCGGGACTATCACTGCTGATTTGGAAGCAGCAGACGTTTACTCATATCCAGAGGACAACAGCGTCTTAGACCCACATCTAGCACAGCATCTGGCCTTTTTTGGCATTGACTTCTCATCACTACAAAAGACTGAAATGACGACCGCCGAAAGAGAACTTGATCACAATACCAATTTCAATTGGAATCGGATCCAAGAAAGTGGAGAGGAAAAGGAACCAATTTTTGGACCTGGATACACGGGATTGGTCAATCTTGGCAACAGTTGTTACTTGGCAGCAACTATGCAAGTTGTGTTCACAACAAGATCATTCTGTTCAAGGTACTATATAAACCAAAGTCTGAAAAAGGCATTTGAGACGGCTCCTGCTGATCCAACCGTGGACTTGAATATGCAACTGACAAAACTGGCCCATGGTCTACTATCTGGCAAATATTCTATTTTGCCAGTCTATGAGAATGATGACAATTCAAGCATTGATGCCACAACTAAGACTCCAAAACAGGAAGGGATACCTCCACGTATGTTCAAGCCTGTGATTGCTGCCAGTCATCCTGAATTTTCATCTATGCGGCAACAGGATGCTTTAGAATTTTTCCTTCATTTTCTCGATCAAGTTGAAATATCTAATGCTGGGAAAGCTGAACTAGATCCTGCAAAGTGTTTCAAGTTTGGTATTGAAGATCGAATCTTGTGTTCATCTGGAAAAGTTGCATATAATAAAAGACAAGACTACATTCTATCTCTTAATATCCCATTGCACGAAGCAACTAATAAAGAAGAAATGGAATTATTTCGCAAATTGAAAGCAGAGAAGCTTTCTGAAGGGAAGGATGTGTCGGCCGATGAGATTGTACGTCCAAGAGTTCCTTTAGAAGCTTGCCTTAGAAACTTCTCAGCTCCAGAGGAGATACATGATTTTTACAGCACTGCCTTAAAAGCAAAGACAACAGCATTGAAGACAGCTGGTTTCACATCATTCCCTGATTACCTTGTGTTACATATGAGGTAATTCGTTATGGAGGAGGGATGGGTGCCCAAAAAGCTTGATGTGTACATAGATGTTCTTGATATCATAGATATTAATCATATGCGTAGCAAAGGTAATCACCCAGGGGAAGAACTGTTACCAGATGCGGAACCCATTGACGAGGATTCAAACCAGCCTTCCGCCAATGAAGACATTGTGGCACAGCTGGTTTCCATGGGTTTTAACCAGCTTCATTGTCAGAAGGCAGCTATTAACACCTCAAATGCTGGAGTAGAGGAGGCAATGAATTGGTTACTATCTCACATGGATGATCCAGATATTGACAGTCCTATTTTAAAAGGCAACAGCTCTGACAACGTTGATCAATCAAAAGTGGACATACTCATTTCTTTTGGATTTGAAGATCATGTTGCTCGAAAGGCATTGAAGGCATCGGGTCAAGACATTGAGAAGGCAACAGAGTGGATATTCAGCAATCCCAATGCATCAGTTTCTAGTATGGATGCTAGTGCATCAAACACAACCTCTGCTTCAAATGATGTTGGCTTGTCAGATGGAGGAGGAAAATATCGACTTATAGGAATTGTTAGCCACATGGGAACCTCGACACATTGTGGTCACTATGTAGCTCACATTTTGAAAGAAGGTAGATGGGTTATTTTCAATGACGCCAAGGTTGCGGTTTGTCCCAAGGACATGGGCTATCTATATTTTTTCGAGAGGATTGATGGTTGA 2343 0.4238 MLPLLRYTRKKSEGGLYIDMFTFLAFGKDCVGWNFEKTGNPVYLHVKKTKKLVPEDRPTKKPTRLAIGVEGGFDNNEPEYEETHTIVILPNYISLPFPSVELPEKVRLAADAIVLAEGAERKEQVAAWTADKKTVSTYAMNLQQLDNGVVIPPSGWKCAKCDKTDNLWLNLTDGMILCGRRNWDGSGGNNHAVEHYNETGYPLAVKLGTITADLEAADVYSYPEDNSVLDPHLAQHLAFFGIDFSSLQKTEMTTAERELDHNTNFNWNRIQESGEEKEPIFGPGYTGLVNLGNSCYLAATMQVVFTTRSFCSRYYINQSLKKAFETAPADPTVDLNMQLTKLAHGLLSGKYSILPVYENDDNSSIDATTKTPKQEGIPPRMFKPVIAASHPEFSSMRQQDALEFFLHFLDQVEISNAGKAELDPAKCFKFGIEDRILCSSGKVAYNKRQDYILSLNIPLHEATNKEEMELFRKLKAEKLSEGKDVSADEIVRPRVPLEACLRNFSAPEEIHDFYSTALKAKTTALKTAGFTSFPDYLVLHMRXFVMEEGWVPKKLDVYIDVLDIIDINHMRSKGNHPGEELLPDAEPIDEDSNQPSANEDIVAQLVSMGFNQLHCQKAAINTSNAGVEEAMNWLLSHMDDPDIDSPILKGNSSDNVDQSKVDILISFGFEDHVARKALKASGQDIEKATEWIFSNPNASVSSMDASASNTTSASNDVGLSDGGGKYRLIGIVSHMGTSTHCGHYVAHILKEGRWVIFNDAKVAVSXPKDMGYLYFFERIDG 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02650 781 ProSiteProfiles Zinc finger UBP-type profile. 134 244 IPR001607 GO:0008270
Arst2g02650 781 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 726 744 IPR018200 GO:0004843|GO:0006511
Arst2g02650 781 SMART Zf_UBP_1 157 212 IPR001607 GO:0008270
Arst2g02650 781 SUPERFAMILY Cysteine proteinases 282 780 IPR038765 -
Arst2g02650 781 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 117 778 - -
Arst2g02650 781 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 83 IPR013083 -
Arst2g02650 781 Gene3D Cysteine proteinases 279 781 - -
Arst2g02650 781 FunFam Ubiquitin carboxyl-terminal hydrolase 595 637 - -
Arst2g02650 781 Pfam Variant UBP zinc finger 7 51 IPR041432 -
Arst2g02650 781 Pfam UBA/TS-N domain 598 634 IPR015940 -
Arst2g02650 781 Pfam UBA/TS-N domain 657 692 IPR015940 -
Arst2g02650 781 Pfam Zn-finger in ubiquitin-hydrolases and other protein 158 232 IPR001607 GO:0008270
Arst2g02650 781 FunFam Ubiquitin carboxyl-terminal hydrolase 638 700 - -
Arst2g02650 781 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 287 302 IPR018200 GO:0004843|GO:0006511
Arst2g02650 781 FunFam Ubiquitin carboxyl-terminal hydrolase 122 231 - -
Arst2g02650 781 SUPERFAMILY RING/U-box 135 244 - -
Arst2g02650 781 SUPERFAMILY UBA-like 651 697 IPR009060 GO:0005515
Arst2g02650 781 CDD Peptidase_C19B 287 777 - -
Arst2g02650 781 MobiDBLite consensus disorder prediction 573 595 - -
Arst2g02650 781 Gene3D - 632 701 - -
Arst2g02650 781 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 122 231 IPR013083 -
Arst2g02650 781 Gene3D - 594 631 - -
Arst2g02650 781 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 596 637 IPR015940 -
Arst2g02650 781 FunFam Ubiquitin carboxyl-terminal hydrolase 279 616 - -
Arst2g02650 781 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 655 695 IPR015940 -
Arst2g02650 781 SMART uba_6 598 636 IPR015940 -
Arst2g02650 781 SMART uba_6 657 694 IPR015940 -
Arst2g02650 781 Pfam Ubiquitin carboxyl-terminal hydrolase 286 776 IPR001394 GO:0004843|GO:0016579
Arst2g02650 781 PIRSF UBP 4 780 IPR016652 GO:0004843|GO:0016579
Arst2g02650 781 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 286 779 IPR028889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02650 Arst-Chr2 82640978 82647209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02650 595 653 C2H2 Transcription Factor Family AT1G04850 35.000 9.68e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02650 K11836 - gmx:100805602 1275.38