Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02627 ATGGATTGCATTGATCCAAGTGGTAACACCATCACATGTGCATCAATAGAAGAACAAGGCTCATCTTCAAACCCAAACAACAAGAGGAAGAAAGGTAATGCTATGAACAACAATAAGAAGAAGAACAAGGGAGTGATGAAACTCTCAACTGACCCACAAAGTGTGGCAGCAAGAGAAAGAAGGCACAGAATCAGTGACAGGTTCAAGATCCTTCAGAGCATGGTCCCTGGTGGCAGCAAGATGGACACTGTTTCTATGTTGGAAGAAGCCATTCACTATGTTAAGTTCCTCAAGGCTCAGATTTGGCTTCACCAAACTTTGATGATGAACTATGATCATGTGGATAACAACAACAACAACAATAATAATAATGATAATAGTATAAATGATCAGTGCTATTATTATTGTTACCCTGCTGATCAGGACATTGTTGTTCCTCTTCATCAGCAACAAAATGTTTCTCCATCAGTTTTTGAGACCTTACCGGAGCTACCATTATCTCAGTGTTGCATTCAAGGTGATGAAGCCACTACCAATATTGATGCTTCTGTTTTGAAAAATTGGTGGCCACCTTATTAA 579 0.3938 MDCIDPSGNTITCASIEEQGSSSNPNNKRKKGNAMNNNKKKNKGVMKLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKAQIWLHQTLMMNYDHVDNNNNNNNNNDNSINDQCYYYCYPADQDIVVPLHQQQNVSPSVFETLPELPLSQCCIQGDEATTNIDASVLKNWWPPY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02627 192 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 97 IPR011598 GO:0046983
Arst2g02627 192 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 35 131 IPR045843 GO:0003700|GO:0006355
Arst2g02627 192 SMART finulus 54 103 IPR011598 GO:0046983
Arst2g02627 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 53 108 IPR036638 GO:0046983
Arst2g02627 192 MobiDBLite consensus disorder prediction 17 49 - -
Arst2g02627 192 FunFam Transcription factor LAX PANICLE 51 114 - -
Arst2g02627 192 CDD bHLH_AtIND_like 49 109 - -
Arst2g02627 192 Gene3D - 51 124 IPR036638 GO:0046983
Arst2g02627 192 MobiDBLite consensus disorder prediction 17 60 - -
Arst2g02627 192 Pfam Helix-loop-helix DNA-binding domain 58 97 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02627 Arst-Chr2 82281402 82282006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02627 39 115 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 53.247 6.27e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst2g02627 HLH 6.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02627 - - adu:107475363 355.14