Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02608 ATGGACATGGACGTCGACGAAGCTTCTCGACCCAAAGAGGGAAAGGCCATTTTAGTCATTTTAGTGGGAGCACCGGGAAGTGGCAAATCAACTTTCTGTGAAGAAGTGATGCGTTCTTCAACTCGCCCTTGGATTCGCGTTTGCCAGGACACCATTGGAAATGGTAAAGCAGGAAGTAAAGCTCAATGCCTGAGCAGTGCAGCTAGTGCATTGAAGGATCATAAGAGTGTGTTTATTGATAGGTGCAATCTTGACAGAGAGCAGCGCTCCGAATTCGTAAAGCTAGGTGATGTGCACAAAATAGATGTGCATGCAGTTGTGCTTGATCTTCCTGCTAAACTTTGTATTTCTCGATCCGTTAAACGGACTGGCCATGAAGGAAACCTTCAGGGTGGAAAAGCTGCAGCAGTTGTGAATAGAATGCTTCAAAAGAAAGAGCTGCCCAAATTAAGCGAAGGCTATAGCCGGATAACATTTTGTCAGAGTGAAAGTGATGTCAAAGGTGCCATTAATACATACGGCTCACTTGGGCCACTGGATAACCTCCCACATGGCTGCTTTGGCCAGAAAAATCCAGATTCAAAAGTTCAAGTTGGTATAATGAAGTTCCTAAAAAAGGTGCCAGCCCCTGATGCAGCAGCAAGACCTGATGGAAGTGGAGACACTACGTCCCAAAATCCTGGGAAAAATGATTATTTCCACAAAGATGTAGAAATGGCATACCCAATTCTAGATAATCCCAACTTAGAGTCAAAGGAAGGAGAAAGCCAGGGAGTGGCCTTCGATGGTTCCCATGCCAGTCGAGTTTCTCTGGATGATGCTCCCACTCTGGCATTTCCATCTATTTCAACATCTGATTTCCAATTCAATTATGAAAAGGCAGCTGATATTATTGTTGAGAAGATTGCAGAGTTTACAGCTAAGCTTGGCAATGCTAGACTTGTGCTGGTTGATTTGACTCATAAATCAAAGATTCTTTCCTTGGTTAAAGCCAAAGCATCTGAAAAACACATTGACACCCAAAAGTTTCTTACCCATGTCGGTGACATTACTAAACTTCATTCTACAGGAGGTTTAAACTGTAATGTCATAGCTAATGCTGCCAACTGGCGGTTAAAACCTGGAGGTGGAGGTGTTAATGCAGCCATTTTTAATGCTGCGGGTCCTGAACTGGAGTCTGCAACCAAAGAAAGAGCAAAATCTCTTTCACCTGGAAATGCTGTTGTTGTCCCTCTACCTGCATCTTCTCCTTTGTTTGTTACAGAGGGTGTAACCCATGTCATACATGTTCTTGGACCTAATATGAACCCTCAAAGGCCAAATTGTCTCAACAATGATTATGAAAAAGGATGCAAAATTCTTCAAGATGCTTATGCTTCCCTATTTGAAGGCTTTGCATCAATTGTGAGGACCCAGGCAGGGCAATCTAGAGAAAAAAATGAAAACATTGTAAAAAAGGCTTTGAAATTGCAGGATAAATCTGAATGTCATTCCAGAAATAATTTGACAAATATTGATCAAAAGAATAAGAGAGATGCTGATCATGGGTCTGAGAAGAGCAAAAAATGTAAGGGAATTCAGGATAGTTTTGGAGTGAGCTCTAATTCCAGAGATGAAAGGGTAGATTCGGAGCATAGAAGAAATGGTGGGAGCATGAATAAGGCATGGGGATCATGGGCACAAGCTCTTCATCAAATGGCTATGCATCCTGAGAAACATAAAGATGACTTGCTTGAGATTTCAGAGGATGTTGTTGTTCTGAATGATCTCTATCCTAAGGCAAAGAAACATGTTCTCATTTTGTCTCGTACCAGAGGAGTTGATTGCCTGGAAGATGTCCAGAAAGAACACTTTCAGTTGCTGAAGAAGATGCATGATGTGGGTTTAAAGTGGGCCAGGAAGTTCCTAGATGAGAATGCTTCACTGGTCTTTCGCCTTGGATATCACTCAGCTCCGTCAATGCAACAACTGCATTTACATGTTATCAGCCAGGACTTTGATTCAAAACATATGAAGAACAAGAAGCACTGGAACTCATTCAACACTGCTTTCTTTCGCGACTCGATAGACGTAATGGACGAGGTCTCTAGTCATGGGAAAGCAACACTGAAAGATGATGATAAGCTGTTGTCCATGGAGTTGAGGTGCCACAGATGTAGAAGTGCGCATCCAAATGACAAGCTTTTGTTTACATTGCTACTATGCTAG 2208 0.423 MDMDVDEASRPKEGKAILVILVGAPGSGKSTFCEEVMRSSTRPWIRVCQDTIGNGKAGSKAQCLSSAASALKDHKSVFIDRCNLDREQRSEFVKLGDVHKIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQKKELPKLSEGYSRITFCQSESDVKGAINTYGSLGPLDNLPHGCFGQKNPDSKVQVGIMKFLKKVPAPDAAARPDGSGDTTSQNPGKNDYFHKDVEMAYPILDNPNLESKEGESQGVAFDGSHASRVSLDDAPTLAFPSISTSDFQFNYEKAADIIVEKIAEFTAKLGNARLVLVDLTHKSKILSLVKAKASEKHIDTQKFLTHVGDITKLHSTGGLNCNVIANAANWRLKPGGGGVNAAIFNAAGPELESATKERAKSLSPGNAVVVPLPASSPLFVTEGVTHVIHVLGPNMNPQRPNCLNNDYEKGCKILQDAYASLFEGFASIVRTQAGQSREKNENIVKKALKLQDKSECHSRNNLTNIDQKNKRDADHGSEKSKKCKGIQDSFGVSSNSRDERVDSEHRRNGGSMNKAWGSWAQALHQMAMHPEKHKDDLLEISEDVVVLNDLYPKAKKHVLILSRTRGVDCLEDVQKEHFQLLKKMHDVGLKWARKFLDENASLVFRLGYHSAPSMQQLHLHVISQDFDSKHMKNKKHWNSFNTAFFRDSIDVMDEVSSHGKATLKDDDKLLSMELRCHRCRSAHPNDKLLFTLLLC 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02608 735 Pfam Macro domain 365 443 IPR002589 -
Arst2g02608 735 MobiDBLite consensus disorder prediction 210 231 - -
Arst2g02608 735 Pfam Scavenger mRNA decapping enzyme C-term binding 570 676 - -
Arst2g02608 735 MobiDBLite consensus disorder prediction 504 525 - -
Arst2g02608 735 ProSiteProfiles Macro domain profile. 330 506 IPR002589 -
Arst2g02608 735 PANTHER APRATAXIN-RELATED 277 725 - -
Arst2g02608 735 SMART YBR022w_8 342 484 IPR002589 -
Arst2g02608 735 FunFam aprataxin isoform X2 557 730 - -
Arst2g02608 735 MobiDBLite consensus disorder prediction 535 549 - -
Arst2g02608 735 MobiDBLite consensus disorder prediction 498 553 - -
Arst2g02608 735 Pfam AAA domain 18 144 - -
Arst2g02608 735 Gene3D - 558 728 IPR036265 -
Arst2g02608 735 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 160 IPR027417 -
Arst2g02608 735 Gene3D - 3 173 IPR027417 -
Arst2g02608 735 SUPERFAMILY Macro domain-like 324 463 IPR043472 -
Arst2g02608 735 ProSitePatterns HIT domain signature. 645 663 IPR019808 -
Arst2g02608 735 FunFam Transcription factor bHLH140 323 470 - -
Arst2g02608 735 FunFam Transcription factor bHLH140 6 175 - -
Arst2g02608 735 Gene3D Leucine Aminopeptidase, subunit E, domain 1 316 470 IPR043472 -
Arst2g02608 735 SUPERFAMILY HIT-like 560 720 IPR036265 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02608 7 725 C2H2 Transcription Factor Family AT5G01310 58.971 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02608 K10863 - gmx:100786762 1136.71