Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02600 ATGAACCTCACTCTCTATCACTTAGGAATGGAGGGTTCAAAATCATTTGGAATAAAGCAAGAAGGGTATCATAATCCTTCATCCATCATGAAAACAGAGGAATTCTCGCTCCGACGCAGCAAAGTGAAGCAAGCATTGATGATATTTCGGAACTTGTTTTCAAAACTCTTTAGCGAGTACAAAACAGATCACTATGATAATGTGAAAGCAAAATTTAAAGCTTTGAATGATGCTGCAATGTTGATGCAGAGGAAGCATCAATGGGTGAACTGCCAAAAACGGGTGGGGCATGTCCCCGGGATTGAAGTTGGAGACCGATTTCAGTATAGGAATGAACTCAATGTCGTCGGCCTCCATCGCCAGTTTGTCAATGGAATCGATTACGTGGGGAAGGGCAAGAACTCTTTAGCCACAAGCATTGTTGTAACCAATCGCTACGATAATGCTAGAAATCATGGTGGTTCATTGGTTTATAGTGGTCATGGATGGAATCCTAATGTGAAAGGTGGATCTATGCCCCGTGATCAAAAGTTGGCCGGCGGAAATCTTGCTTTGAAGAATAGCATGGATGCTAAGAGTCCGGTGCGGGTTATATTGAAGGTTGATGGAAAATCTGGTGGAGGCATAGAGAAGAAAACCAATGATAAATTCTCATATATATATGATGGATTGTATTTGGTTGAGAAGATGATACAAGAAAGAGGAACTCATGGGAAACTTGTATTCAAGTTTTTGTTGAACAAACTTGAAGAGCTACCTTCAACTTGTGTTCCCCCCAAGGATGAGGTTATCAAGAATGTCAACAAATTTGGGCAACTTGATATTTTCACCTTGAGGAAAAGGCTCAAAACTAAAGGTTGTGCAACTAAAAATGATGTTATTATCATGAATGATATCTCTAACGGACAAGAGAAGTTTCCTATTCGAGTCGTTGCATCAACTGATGGTATTAAAAGGCCTCCATCTTTTGATTACATAGTAAACAACATTTATGTTGATAGCTTCGAGAAGCCAATGTTATGTGGTTGTGACTGTGTAAATGGATGTGTGGATTGGGAGAAATGTGTCTGTATTGTTAAGAATGGTGGAACAATACCATATGACTCTAAGAAAAGACTTGCTTCTGGATTGGAATCACGTGTTATATACGAGTGCGGCTCTTCTTGCAAGTGTTCCTCATCTTGCTACAACCGATTAAGTCAACATGGCCTTCAATTCCAACTTGAAATATTCAACTCCGAATCAAAGGGCTGGGGTGTTAGAACGCGCTCGCAGGATAATTTTTTCTCTAGTGGTGTCTTAGTGAGTTTGAGTCTTGGGGGGGAAGGGAAAAAATTTACTCCTAAATTCGTAAACTCTTTAAGAGTTTACGAGTTCGCACGAGAGTTTGATAACCTTGAAAGGAAAGTCTTGAAGATTGTTGAAAAGTGTTTCATTGATGCTACAAGACGCGGAAACATTGGAAGATTCATAAACCATAGCTGTTGTCCTAATCTTCAAGTCATGGAGGTTATGTATGATGACAATGATAAGAACCTTCCCCATAAAATCTTTTTTGCATTACAGGACATACCTGCTGGAAGAGAGCTGAGTTTTGATTACAACATCTGCAAGCCAAGGGTTATCGGGACTGGCAGCAACATTTGCCAATGTGGTTCACCCAAATGCGTTGGGCGAATTTACATTTAA 1689 0.4002 MNLTLYHLGMEGSKSFGIKQEGYHNPSSIMKTEEFSLRRSKVKQALMIFRNLFSKLFSEYKTDHYDNVKAKFKALNDAAMLMQRKHQWVNCQKRVGHVPGIEVGDRFQYRNELNVVGLHRQFVNGIDYVGKGKNSLATSIVVTNRYDNARNHGGSLVYSGHGWNPNVKGGSMPRDQKLAGGNLALKNSMDAKSPVRVILKVDGKSGGGIEKKTNDKFSYIYDGLYLVEKMIQERGTHGKLVFKFLLNKLEELPSTCVPPKDEVIKNVNKFGQLDIFTLRKRLKTKGCATKNDVIIMNDISNGQEKFPIRVVASTDGIKRPPSFDYIVNNIYVDSFEKPMLCGCDCVNGCVDWEKCVCIVKNGGTIPYDSKKRLASGLESRVIYECGSSCKCSSSCYNRLSQHGLQFQLEIFNSESKGWGVRTRSQDNFFSSGVLVSLSLGGEGKKFTPKFVNSLRVYEFAREFDNLERKVLKIVEKCFIDATRRGNIGRFINHSCCPNLQVMEVMYDDNDKNLPHKIFFALQDIPAGRELSFDYNICKPRVIGTGSNICQCGSPKCVGRIYI 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02600 562 ProSiteProfiles YDG domain profile. 96 248 IPR003105 -
Arst2g02600 562 SMART preset_2 296 390 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Arst2g02600 562 SMART set_7 406 541 IPR001214 GO:0005515
Arst2g02600 562 SUPERFAMILY PUA domain-like 78 254 IPR015947 -
Arst2g02600 562 Gene3D SET domain 273 540 IPR046341 -
Arst2g02600 562 Gene3D - 77 270 IPR036987 -
Arst2g02600 562 SUPERFAMILY SET domain 288 541 IPR046341 -
Arst2g02600 562 ProSiteProfiles SET domain profile. 406 535 IPR001214 GO:0005515
Arst2g02600 562 Pfam SET domain 463 535 IPR001214 GO:0005515
Arst2g02600 562 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 37 554 - -
Arst2g02600 562 Pfam SAD/SRA domain 95 250 IPR003105 -
Arst2g02600 562 SMART G9a_1 91 252 IPR003105 -
Arst2g02600 562 ProSiteProfiles Pre-SET domain profile. 341 403 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Arst2g02600 562 Pfam Pre-SET motif 299 398 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02600 Arst-Chr2 82007821 82010509 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02600 74 558 Su(var)3-9 homologs AT1G73100 33.650 2.55e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst2g02600 SET 1.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02600 - K11420 aip:107627681 818.535