LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst2g02572	ATGTCAGGTATATTTACGGACACTGAGATGAATGAGCAATACCAGGAGGACGATGACTTTAACCAACAAGAAGAGCTAGTAAGTGACCAAGATATGATGGATGAACAGAATGAATTCGAACAAGATTTCAGAGATGAATTTACCGAGGGAGCATTTTTTTCTGAATCTGATATGTCAGATTATATCCTTGAAGCCGCTTATGCGGTTGACTCCGTGCAAGACATTACATCTTTGAAATTTAGTGAGAACTTTGCGGAGGAAATTGGCAAATACCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATATGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAAAATAGTAGTTGCGAGATTTACAGACAAATGTTTGTATGCCATAGGCAAGGATTCAGGATGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAAGTGGAAGGTGGCATATCTTTTATTTCTCTGACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCAGGGATCAGCACCTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCGGGTACGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCGTCAAATTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTAACGATTCAAGAGGTTTGTTACGTAATTTGTTCTGGTCTGATGGAATTAGCCAACTAGACTACCGACTCTTCGGGGATGTTATTGCTTTTGATGCTACGTACAAGAAGAACAAGTATAGTTGTCCATTAGTAATATTCAGCGGGGTTAACCACCACAACCAAACAACTGTTTTTGCTGCTGCGTTAATCGCGGACGAAACTATTGATACATATGTTTGGCTTCTGCGTCAGCTCATGTTTGCAATGAGGGGCAAGACCCCGACCTCAATCATAACTGATGGGGCCATGGCGATTAGGAATGCAGTGAGAGATGTATTTCCCGAAGTCAGACATAGATTATGCGCTTGGCACCTTATTCGAAATGCAACTAGCAATGTTGGAAATCCATCGTTTACATCTAAATTTAGAAAAATCATGACAGGAGACTACGAGATTCCCGTGTTTAAGCGTAAGTGGGTTCAGCTTATTGAAGAATTTGGCATTGAGGATAAGCCGTAG	1350	0.4104	MSGIFTDTEMNEQYQEDDDFNQQEELVSDQDMMDEQNEFEQDFRDEFTEGAFFSESDMSDYILEAAYAVDSVQDITSLKFSENFAEEIGKYHFSTLQLAFDFYMKYSKSKGFSARKSKTFKNSSCEIYRQMFVCHRQGFRMEKYYTMEKRKKEPRLETRTGCEARMDVKFVPESGRWHIFYFSDEHNHDLLDTQFSAMLPAHRKMSEADIMQMMNMLKSGISTSQIFGLLASQAGGYEFVGYGPRDMYNEIARQRRQIPGDAARVLKKLEDMRLKDPQLYFKACNDSRGLLRNLFWSDGISQLDYRLFGDVIAFDATYKKNKYSCPLVIFSGVNHHNQTTVFAAALIADETIDTYVWLLRQLMFAMRGKTPTSIITDGAMAIRNAVRDVFPEVRHRLCAWHLIRNATSNVGNPSFTSKFRKIMTGDYEIPVFKRKWVQLIEEFGIEDKP	449

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst2g02572	449	Pfam	FAR1 DNA-binding domain	101	191	IPR004330	-
	Arst2g02572	449	Pfam	MULE transposase domain	311	405	IPR018289	-
	Arst2g02572	449	MobiDBLite	consensus disorder prediction	1	22	-	-
	Arst2g02572	449	PANTHER	OS01G0519700 PROTEIN	90	446	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst2g02572	Arst-Chr2	81420791	81422140	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Arst2g02572		MULE	5.1e-28	CL0219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst2g02572	-		-	ahf:112720852	885.945