Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02539 ATGGGAAAGTCTTTCAAGGATTCACTCAAAGCACTTGAAGCTGACATACACTTTGCAAATACTCTAGCTTCTGATTATCCGAGAGAATATGATGGCGCCACCTTACAAATGAGATTGTCTTTTAGCCCCGCTGCCCAGTTTTTCCTTTTCTTAGTCCAGTGGACCGATTGTCAGCTCGCCGGGGCTTTAGGATTGCTAAGAATTCTCATATACAAGACATACGAAGATGGAAAGACAACCATGTCCATTTATGAAAGAAAAGCCAGTTTGAAGGAGTTCTATGGGGTGATATTTCCTTCTTTATTACAACTTCAGAGAGGAATCACTGATGTAGAAGACAGGAAACAAAAAGATATATGCGCTACGAAGTATAGGCTGAGAGATTCGGCAGGAAAAGGAAAATTATCCGAGATTGATATCGAGAGAGAGGAAGAATGTGGTATTTGCTTGGAAGTAAACAGCATGGTTGTGTTGCCGAATTGCTACCATTCGATGTGTATGAAATGCTACCGAGACTGGCACGCGCGATCGGCATCTTGCCCTTTCTGCCGGGATAGCCTTAAAAGAGTGAACTCCGGCGACCTTTGGATATATATGAGCAACAAGGAAATAGATGACTTGGCTTCAATCAACAAGGAGAACTTAAAGAGGCTGTTTATGTACATTGATAAGTTACCTCTAGTTGTGCCAGCTCCTATGTTCATGACTTATCCTCCACATCGTTTCTGA 729 0.4225 MGKSFKDSLKALEADIHFANTLASDYPREYDGATLQMRLSFSPAAQFFLFLVQWTDCQLAGALGLLRILIYKTYEDGKTTMSIYERKASLKEFYGVIFPSLLQLQRGITDVEDRKQKDICATKYRLRDSAGKGKLSEIDIEREEECGICLEVNSMVVLPNCYHSMCMKCYRDWHARSASCPFCRDSLKRVNSGDLWIYMSNKEIDDLASINKENLKRLFMYIDKLPLVVPAPMFMTYPPHRF 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02539 242 SMART ring_2 146 183 IPR001841 -
Arst2g02539 242 SUPERFAMILY RING/U-box 135 189 - -
Arst2g02539 242 ProSitePatterns Zinc finger RING-type signature. 161 170 IPR017907 -
Arst2g02539 242 PANTHER RING FINGER PROTEIN 41, 151 3 233 - -
Arst2g02539 242 ProSiteProfiles Zinc finger RING-type profile. 146 184 IPR001841 -
Arst2g02539 242 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 193 IPR013083 -
Arst2g02539 242 Pfam Zinc finger, C3HC4 type (RING finger) 143 189 - -
Arst2g02539 242 FunFam RING/U-box superfamily protein 127 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02539 Arst-Chr2 80733907 80737125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02539 90 188 C3H Transcription Factor Family AT5G01960 29.808 2.66e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02539 K25840 - pop:7466068 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g02514 4 91414841 91418524 Arst2g02539 2 80733907 80737125 PCT