Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02501 ATGTGCTGGAATCTCTGCGCACGCACCATTTACTCCAGGCCGGTCATCCCTTGCCGTGTCGCCGCCGTCAACTTTTTCGCGGACCCTAACACCGACGAGGTCTTCCTCAAGATTCTTCTCCTTCCTGTCACCGATGGATCCGCTCAGGATTTTCTTTCACCTGCCGTCGCCGCCGAAGGCAGCGGCAACGGCAATGGCGACGATGAAAAGGTTGAGTCGTACGCCAAGATTCTCACGCGGTCCGATGCGAACAATGGCGGAGGGTTTTCGGTGCCGAGATTCTGTGCGGACTTGATCTTCCCGCCGTTGAACTTTGAAGAGGACCCGCCGGTGCAGACGCTTCGCATAACCGACCTCCACGGCGCCGTTTGGGAGTTTCGCCACATCTACCGAGGGACGCCGAGACGGCACCTCTTCACTTCTGGCTGGAGCAAGTTCGTTAACAGCAAGAAGATTATCTCTGGCGATACTGTGGTCTTCATGAAGGACTCCGATGGCAGGATGTTTGTCGGAATCCGTCGCAATATGTCACCGGACGACGGTATCTCAGACGGCGGATTGGATTGGTTATCAAAGATCGTTGGGATGGACGAGGGGGAAAAGGAAAAAGAAGAGGAAGATGAAGAGGTGATGATGGAAGGGTTTGCAAGAAACGGGAAGGGGAGGGTGAGTTCGGCTTCAGTGGCGGAGGCGATGGAGCTGGCGGCCCAGAACAAGCCGTTCGAAGTTGTTTACTATCCAAGCGTGGGTTGGGGGGAGTTTGTGGTAAAGGCAGAGGATGTAGACGTGAAGATGAACGGTATTCTCTGCAGTGTTGGGATGAGAGTGAAGATGGCTAGAGAGAACTACGATTCTTCACGGATGACTTGGTTTCAGGGAACAGTTTCTGGTGTTACTATTCCCGGTGAAGCTCAACCATGGAGCGGTTCTCCTTGGCGCATGCTTCAGATTACATGGGATGAATCTGAAATCTTGAAGAATGTAAGTCCCGTTAGTCCATGGCAGGTGGAGTTTCTTTCTGGCACACCTTCACTTCCTCAAGTATTTCCCCCAACAAAAAAGTTCAGAACTGCAGACGGTTCTAAAATTTTCAGTCATGAAGTGGAAGAATCCTCCTTTTCCATGACAAGACTTGCTATTCCTGATTTAGCAATGGGAGTGCTGAATCAAACATTGTTGATGAGTAGTTATGGCACCCCTTTTCCTGCTAGCATTCAGGGAGCCAGGCATCCTCTACTTTCTGCACCTACTTGTCCCATTTTTCCGATTAATCCTCCTCTGTCTATTGCTAACTCCTTTGAGAATAACATTAGACCAAGGTTAAATGCTATGTTGACACTCATAAACCTGAAAGCTTATCTCCACATAACAAGTCTAGAGTCCTACACATATAGACTAAAGGCCGCGACTCAACAGTCTCAGCAAAGTGGAGAGGACCTTACCAATGGCTCTGTAGCTTCAATTGTTGATTCCGATGCGGATTGGCGTGAGACCGCCTCAGCGCCGTACAAGAACTACATATACAGGATGGGGTTGTTCTTCGCTAGCAGCCTCCGTACCTCCATGTTGAGGCCGTCGTTAGGCTCCACCACCAGTCGAGCCCAAGGAAAGCGTGGATTTGATGCTGCAGGTACAGGAGCTCCAACGCAGCCTTCAGCACCAGGCTCAGGAATTTAA 1677 0.5069 MCWNLCARTIYSRPVIPCRVAAVNFFADPNTDEVFLKILLLPVTDGSAQDFLSPAVAAEGSGNGNGDDEKVESYAKILTRSDANNGGGFSVPRFCADLIFPPLNFEEDPPVQTLRITDLHGAVWEFRHIYRGTPRRHLFTSGWSKFVNSKKIISGDTVVFMKDSDGRMFVGIRRNMSPDDGISDGGLDWLSKIVGMDEGEKEKEEEDEEVMMEGFARNGKGRVSSASVAEAMELAAQNKPFEVVYYPSVGWGEFVVKAEDVDVKMNGILCSVGMRVKMARENYDSSRMTWFQGTVSGVTIPGEAQPWSGSPWRMLQITWDESEILKNVSPVSPWQVEFLSGTPSLPQVFPPTKKFRTADGSKIFSHEVEESSFSMTRLAIPDLAMGVLNQTLLMSSYGTPFPASIQGARHPLLSAPTCPIFPINPPLSIANSFENNIRPRLNAMLTLINLKAYLHITSLESYTYRLKAATQQSQQSGEDLTNGSVASIVDSDADWRETASAPYKNYIYRMGLFFASSLRTSMLRPSLGSTTSRAQGKRGFDAAGTGAPTQPSAPGSGI 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02501 558 CDD B3_DNA 73 174 IPR003340 GO:0003677
Arst2g02501 558 Gene3D - 71 176 IPR015300 -
Arst2g02501 558 Gene3D - 270 343 - -
Arst2g02501 558 MobiDBLite consensus disorder prediction 525 558 - -
Arst2g02501 558 SMART B3_2 74 176 IPR003340 GO:0003677
Arst2g02501 558 ProSiteProfiles B3 DNA-binding domain profile. 74 176 IPR003340 GO:0003677
Arst2g02501 558 Pfam Auxin response factor 231 316 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst2g02501 558 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 14 412 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst2g02501 558 Pfam B3 DNA binding domain 75 175 IPR003340 GO:0003677
Arst2g02501 558 FunFam Auxin response factor 72 176 - -
Arst2g02501 558 SUPERFAMILY DNA-binding pseudobarrel domain 70 178 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02501 Arst-Chr2 80038058 80047607 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02501 2 410 B3 DNA Binding Superfamily AT1G77850 47.202 1.11e-115 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst2g02501 B3 7.1e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02501 - - ahf:112730398 838.565