Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02489 ATGTATGCAACTATTGGCTATAGCTTATTAGAAGAAGAAGAAGAAATGAACAGGGGAATTGAAGTTCTGTCTCCAGCTTCTTACCTTCACAACTCAAATTGGTTGTTCCAAGAGAGTGCAGGAACCAAATGGACACCACAAGAGAACAAGCAATTTGAGAACGCTTTGGCGCTCTTCGACAAGGAGACGCCGGACCGGTGGCTGAAGGTGGCGGCTATGATCCCGGGGAAGACGGTTGGTGATGTGATCAAACAGTATAGGGAGTTAGTTGAAGATGTGAATGTAATTGAATCTGGGTTCATACCAATTCCAGGGGGAACTACTGATGGTTCTTTCACATTGGAGTGGGTTGATAATCATGAATTTGATGGGTTTAAGCAATTCTATGGTGTTGGTTGCAAAAGGGGTTCTTCCACTAGGCCTTCTGAACAAGAAAGGAAGAAAGGTGTACCATGGACTGAAGAAGAGCACAGGCTATTTTTGATGGGTTTGAAGAAGTATGGTAAAGGTGATTGGAGAAATATATCTCGAAATTTTGTTACAACAAGGACGCCGACGCAAGTTGCAAGTCATGCTCAGAAATACTTTATCCGGCAACTTAACGGCGGCAAGGATAAGCGGAGATCCAGTATCCATGATATCACAATGGTTAATCTCCCTGAAACAAAGTCGCCTTCGTCGGAAAGTAACAAACCTCCCTCTCCAGATGCAAATTTGAATCAGAGTCAGAAGCTTTTGTCAAGCATGGTTAAACAGGAATATGACTGGAAATCACCACCATATGAAGGTGTGCCTTTGGTGTTTGATTCAACAAATGGAAATTCGTTCATGACACCTTTGTGTGGAGCTTCTTCATACGGATCTAAACCTCAGGAGCAGTATTTACTCAGAGGAACTTTCCATGGATTTCAATTTGGACCTTATGATACTTTTATGCAAATGCAACCAATGCAACCTCAGTGA 963 0.4258 MYATIGYSLLEEEEEMNRGIEVLSPASYLHNSNWLFQESAGTKWTPQENKQFENALALFDKETPDRWLKVAAMIPGKTVGDVIKQYRELVEDVNVIESGFIPIPGGTTDGSFTLEWVDNHEFDGFKQFYGVGCKRGSSTRPSEQERKKGVPWTEEEHRLFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLNGGKDKRRSSIHDITMVNLPETKSPSSESNKPPSPDANLNQSQKLLSSMVKQEYDWKSPPYEGVPLVFDSTNGNSFMTPLCGASSYGSKPQEQYLLRGTFHGFQFGPYDTFMQMQPMQPQ 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02489 320 FunFam transcription factor MYB1R1 150 201 - -
Arst2g02489 320 ProSiteProfiles SANT domain profile. 152 200 IPR017884 -
Arst2g02489 320 ProSiteProfiles SANT domain profile. 39 94 IPR017884 -
Arst2g02489 320 CDD SANT 43 90 IPR001005 -
Arst2g02489 320 FunFam Transcription factor SRM1 36 103 - -
Arst2g02489 320 MobiDBLite consensus disorder prediction 203 240 - -
Arst2g02489 320 SUPERFAMILY Homeodomain-like 145 199 IPR009057 -
Arst2g02489 320 MobiDBLite consensus disorder prediction 215 240 - -
Arst2g02489 320 Pfam Myb-like DNA-binding domain 43 89 IPR001005 -
Arst2g02489 320 Pfam Myb-like DNA-binding domain 151 196 IPR001005 -
Arst2g02489 320 CDD SANT 151 196 IPR001005 -
Arst2g02489 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 144 200 IPR017930 -
Arst2g02489 320 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 38 247 IPR043363 -
Arst2g02489 320 NCBIfam myb-like DNA-binding domain, SHAQKYF class 147 199 IPR006447 GO:0003677
Arst2g02489 320 Gene3D - 36 103 - -
Arst2g02489 320 ProSiteProfiles Myb-like domain profile. 144 196 IPR001005 -
Arst2g02489 320 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Arst2g02489 320 Gene3D - 150 200 - -
Arst2g02489 320 SMART sant 40 92 IPR001005 -
Arst2g02489 320 SMART sant 148 198 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02489 Arst-Chr2 79546061 79549153 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst2g02489 Myb_DNA-binding 2.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02489 - - gmx:778077 467.618