Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02479 ATGGCTTCGCCGTCTCCATCAATGGAAAGAAAGTACCCGTTGTATTATCACCCTTCACTTGATTTACAAATATCTCCCTTTTTTTCCGTCATAGGTCTGAAATTGTCTTTGAAGGTTGCCGGGGATGAAGATACCACTGGGGGTGAAGCAGACCATAGAGTTGGATCGGTTGAGGGCGAAGGCTTTGCAAGGTTGGAGTCGGACGAGTACGATTTACAGGAAGATGAAACAGAAAACGACCATCCGGTTGAGGGCAAACGTTCTGCAGGGATGGAGTCGGACGAGAACACTTTCAGGAAGATGATACAGAACACGACCATCATGCAGAGGCCGATGTCGACAATGGGGATGCGGTTGAATTGGAAGACAGTTTGGACGGCGCCGGAGGAATATGTTGACATTGCATTTGAGTTCTACCAACAATATGCAAAGCACCATGGCTTCGGCGCGAGACGTTCCAGAAGCGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTTGTGTGCCACCGACAAGGGTTCCGATCCCCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGCTGGCACGTTGCGTTTTTTTCAGACGTGCATAACCACCACGTTCTTGAGTTGCAATTTTCTTCCATGCTCCCGGGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCTCGAATCTACGGTTTTATGGCGAGCCTGGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCAAGATGCGGAATCGTGCCTAAGGTATCTCCGAGAGTGCAAGGCAAATGATCCAACACTATACTACAAGGAAGTTGTTGACGGTGAGGGCGTGTTGCAACACTTGTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTGTTTGGAGACGTGGTTGCATTTGATGCAACGTACAAGAAAAACGTTTACCTTTCACCTCTTGTAGTATTCTCCGGTGTGAATCACCACAACCAAACGGTTGTCTTTGCCGCTGCACTGGTGGCAGACGAGAAAGAAGAGACCTATGTATGGCTGCTTCAGCAGTTACAAACTTCAATGAAAGGGAAGGCTCCCGTGTCCATAATAACCGACGGTGACAGGCAAATGAAGTCTGCGATCGAGCAAGTTTTTTCAGAGGCTCACCATCGACTCTGCGCTTGGCATCTACTCCGAAACGCCACGAGAAACATCGGAAAGCCCAAATTCACCAGGATGTTTAGGGATTGCATGCTCGGCGACTACAAGGTCCGAACATTTCAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCGTCACCGATAAAAGATGGGTACAGGACATGTACGAGAGAAGGCACAATTGGGCCACAGCACACATACGGGGAAAGTTCTTTGCCGGATTTCGAACAACATCAAGGTGCGAGGGCTTGCACGCTGTGATATCACGGTATGTTAAGTCTCGATATAGCTACACTGAGTTTTTACGTCATTTCCATCGATGCTTGATGTTCGTGTGCGCAAAGGAGGTGGAGGCTGATTTCGAGTGTGCAAAGGGTGACTCTGTTATGACCACCAACCTGAAACAGCTGGAGCGGAGTGCAGTCGACAACTACACTCGTGCGATATTCTATTTATTTGTTCCCATTCTTGACAGGGCCTGTGCAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATCCACACCATCTCTCGATACGGCACTCCGGGGAAGGATTGGCGTGTTGTTGCAACGTTTGATACGAGGGAGGTCCGATGCACGTGCATGAGAATGGAATGTTTTAGGGTCCCATGCGAACATATAATTGCGGTGCTTGTTCTTAACAATGTTCATGAGATCCTGAGGTCTCTGATATTACCGAGATGGACCAAGGATACAAAACTTGTGGCGGTGCAGTCGATGGGCGTGATTTGGGATTCTGTACAACTGACGCAACACTGGTGCCTGAGGGATTGGTACCGGAAAGTGTGCAAGATTGCATGTCACAGCACCGAAAAGTTCCAGTTTGCAAGAGACATAGCCGTGCTGATGCTGAAGCACTTCGAGAACGAAGATGCAGGGAACACCAATTTTCCACCCAAGGGGCCACCTACTGAGGGTGGCAGACCCCTGGCGCGGAATCCACCCAGGCGCAATACAAAGGGTAACGGCGCTCATGGTGGAAAGAAAACCCAGCGATGTCGTTTGTGCCGGGAGGTGGGACACAACAGGACAACGTGTCCGGAGCGCCACACAATGGAACCATCCAGCGCAGTTGCAGAAGACATGGATTCGATGGACACTGACATGGTCTATGATAATTTATCCGGCGATCTGTATGCAACCGCGGAGATTCCTTCGTTCCAATGCTCCGATAGTGACACGCAGGCTGGGTTTGCTAACAGCAACTTCGCTGGGACCAACACGTCCGGACCAGTCATGTCACTCGCCGATTGA 2586 0.5043 MASPSPSMERKYPLYYHPSLDLQISPFFSVIGLKLSLKVAGDEDTTGGEADHRVGSVEGEGFARLESDEYDLQEDETENDHPVEGKRSAGMESDENTFRKMIQNTTIMQRPMSTMGMRLNWKTVWTAPEEYVDIAFEFYQQYAKHHGFGARRSRSEKRGEVRIRQEFVCHRQGFRSPKFYSMPNRQKRPRAETRCGCPARMLLRMDDESGRWHVAFFSDVHNHHVLELQFSSMLPGHRRMSEADIEQMNDMRKGGIGVSRIYGFMASLAGGYHNVPYTTRDMHNVNAKQRREGGQDAESCLRYLRECKANDPTLYYKEVVDGEGVLQHLFWCDGTSQIDYQVFGDVVAFDATYKKNVYLSPLVVFSGVNHHNQTVVFAAALVADEKEETYVWLLQQLQTSMKGKAPVSIITDGDRQMKSAIEQVFSEAHHRLCAWHLLRNATRNIGKPKFTRMFRDCMLGDYKVRTFQRKWFEMVEKFGVTDKRWVQDMYERRHNWATAHIRGKFFAGFRTTSRCEGLHAVISRYVKSRYSYTEFLRHFHRCLMFVCAKEVEADFECAKGDSVMTTNLKQLERSAVDNYTRAIFYLFVPILDRACAMRVVDSEDNGSYFIHTISRYGTPGKDWRVVATFDTREVRCTCMRMECFRVPCEHIIAVLVLNNVHEILRSLILPRWTKDTKLVAVQSMGVIWDSVQLTQHWCLRDWYRKVCKIACHSTEKFQFARDIAVLMLKHFENEDAGNTNFPPKGPPTEGGRPLARNPPRRNTKGNGAHGGKKTQRCRLCREVGHNRTTCPERHTMEPSSAVAEDMDSMDTDMVYDNLSGDLYATAEIPSFQCSDSDTQAGFANSNFAGTNTSGPVMSLAD 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02479 861 Pfam MULE transposase domain 346 440 IPR018289 -
Arst2g02479 861 SUPERFAMILY Retrovirus zinc finger-like domains 762 797 IPR036875 GO:0003676|GO:0008270
Arst2g02479 861 ProSiteProfiles Zinc finger SWIM-type profile. 623 659 IPR007527 GO:0008270
Arst2g02479 861 MobiDBLite consensus disorder prediction 736 775 - -
Arst2g02479 861 Pfam FAR1 DNA-binding domain 137 226 IPR004330 -
Arst2g02479 861 MobiDBLite consensus disorder prediction 69 92 - -
Arst2g02479 861 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 133 729 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02479 Arst-Chr2 79424839 79427681 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst2g02479 MULE 2.6e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02479 - - aip:107647116 1416.36