Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02458 ATGTTTTCCCAAAACCAGGATCCCGAATTCACATTCAATCCCCACAGAACAATCATGTATGACGTGTACATAAGTTTCGAACCCCATTACCCTTCCCATCCTTTCATTTCACTTCTCTCTGGCGCTCTCAAACGTGCTGGAGTGCATCTTTTTCTGGACAACTACATGAAGCCAAAAAGTAAAGACCTCATACTATCTAGCGTAATCAAAGGATCCAGAGTTTCTATCGTAGTTTTCACTACCGATTTTGCTTGTACAACCTGGAGTTTGAAAGAGCTTGAGAAAATAATGGAGTATCGCAGCAGCAGAGGTCAGCAAGTTGTGCCTGTGTTCTATGAGGTAGATCCCAAGGAAGTGTTTAATCAGAGTGGCCATTTCGGAGAAGCTTTGTTGGCTACTCTGGCAAGAACTTCAACCAATCAAGCCAAGGTGGTGAGTTATATGACCGCGCTAAAAGAAGCTGCTGCCATTTCACCAAGGTTTCTCACCAATTTTCGGGATAGAAGCAAAACCATAGATAGTATCGTTGGACATGTTACCTCTTTGCTAGATTCAACAGCCTTATTCGTTGCAGAACATCCAGTAGGAGTAAACTCTCACGTGCAAGATTTGATTCAACTGTTAGATAATAAGAAATCAGATAGTGTTTTCATTATGGCAATATGGGGTATGGGAGGAATTGGTAAAACAACAGTTGCCAAAGTCCTCTACAATCAAATTAGTCACAATTTCGATGTGAGGAAGTTTGTCCCAGACATAGATGAAAGGATGGAGGATTTCCCAAGAAGGTGGCCTTTGGGCATTATAGAAGAGGAGCTTCTTTTGTTTCTCAAAGAACAAGTTGCAACAAAAGCTTGCAATTTCGACTCAACAAGTGTTATATGGTGGGAAGGAATTCGTTGTGTAAAGGTATTGCTTGTACTTGACAATGTGAGAAGTGAAAAAGAGCTGGAGGTTTTGCCTGTAACTTGTGAATGCTTTGGTCCTGGGAGTATAATAATCATCACCACAAGGACTAAACATGATCAGTTTAATGAGATTGGAATTAATCATGTTTACAGACTGAAAGAAATGGATTACAACGAATGTGTTGAGCTTTTTAGTCAGAGTGCTTTCAAGAAAGCAACTCCTGAAAGGAATTATGCTGATCTGATTAATCGTGCACTTGAATATTCTGATGGATTGCCACTAGCTCTTGTGGCAGTTGGATCTGTATTATTTGAAAAAGGTAGAGTAGAGTGGGAGAGTGTATTGGAAAGGCTTAAAAGATTTCCCCTTCAAGATGTATGGCAAGTTTTAAGAAAAAGCATTGATTCTTTGGGATATGACATGAAGCAAATGTTTCTTGTGCTAGCTTATTTGAGTCATTTCTTTATTGGAATGGACCGAAATGATGTAACTCAAATATTACAAAAAGCTGGATGTGATGTGGTACAAAGGCCTTATGATGTATTCTTGAGCTTTCGAGGCAAAGACACTCGTTCCAATTTCATGTCACATCTTCATGCATCTCTTGAAAATGCTAGTATCTATGTTTTCAAGGATGATGATGAGGAAGCAAGAGGGGAAAATATCTCACTTTCACTTCTAAAAGCAATTGGAGAGTCTAGAATTTCTATCATTATTTTGTCACCAAATTATGCAGATTCAAAATGGTGCTTGCAGGAGTTGGAAGACATAATGAGATGTTATAATAATCAAACTCAAAAGGTGTTGCCAGTGTTCCACCATGTTGATCCATCAGAAGTGCGAAATCAAGCTGGTAGATTTGGAGAGGCTTTTGAAGAATTTATAAAGAAAAACCCCCAAAATAAAGTCAAAGAGCAGGATTGGAGGAAAGCACTCCGTGATGTAGGCTCCACTGCTGGATTTGTTGTTCAAAATTGGAGGTAA 1893 0.392 MFSQNQDPEFTFNPHRTIMYDVYISFEPHYPSHPFISLLSGALKRAGVHLFLDNYMKPKSKDLILSSVIKGSRVSIVVFTTDFACTTWSLKELEKIMEYRSSRGQQVVPVFYEVDPKEVFNQSGHFGEALLATLARTSTNQAKVVSYMTALKEAAAISPRFLTNFRDRSKTIDSIVGHVTSLLDSTALFVAEHPVGVNSHVQDLIQLLDNKKSDSVFIMAIWGMGGIGKTTVAKVLYNQISHNFDVRKFVPDIDERMEDFPRRWPLGIIEEELLLFLKEQVATKACNFDSTSVIWWEGIRCVKVLLVLDNVRSEKELEVLPVTCECFGPGSIIIITTRTKHDQFNEIGINHVYRLKEMDYNECVELFSQSAFKKATPERNYADLINRALEYSDGLPLALVAVGSVLFEKGRVEWESVLERLKRFPLQDVWQVLRKSIDSLGYDMKQMFLVLAYLSHFFIGMDRNDVTQILQKAGCDVVQRPYDVFLSFRGKDTRSNFMSHLHASLENASIYVFKDDDEEARGENISLSLLKAIGESRISIIILSPNYADSKWCLQELEDIMRCYNNQTQKVLPVFHHVDPSEVRNQAGRFGEAFEEFIKKNPQNKVKEQDWRKALRDVGSTAGFVVQNWR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02458 630 Gene3D - 183 345 IPR027417 -
Arst2g02458 630 PRINTS Disease resistance protein signature 218 233 - -
Arst2g02458 630 PRINTS Disease resistance protein signature 298 312 - -
Arst2g02458 630 PRINTS Disease resistance protein signature 392 406 - -
Arst2g02458 630 ProSiteProfiles TIR domain profile. 480 630 IPR000157 GO:0007165
Arst2g02458 630 ProSiteProfiles TIR domain profile. 18 155 IPR000157 GO:0007165
Arst2g02458 630 FunFam Disease resistance protein (TIR-NBS-LRR class) 478 630 - -
Arst2g02458 630 Gene3D - 17 182 IPR035897 -
Arst2g02458 630 SUPERFAMILY Toll/Interleukin receptor TIR domain 479 624 IPR035897 -
Arst2g02458 630 Gene3D - 479 630 IPR035897 -
Arst2g02458 630 Pfam NB-ARC domain 199 440 IPR002182 GO:0043531
Arst2g02458 630 Gene3D - 358 448 IPR042197 -
Arst2g02458 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 451 IPR027417 -
Arst2g02458 630 Pfam TIR domain 482 617 IPR000157 GO:0007165
Arst2g02458 630 Pfam TIR domain 20 180 IPR000157 GO:0007165
Arst2g02458 630 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 470 IPR044974 GO:0006952
Arst2g02458 630 SMART till_3 481 621 IPR000157 GO:0007165
Arst2g02458 630 SMART till_3 19 157 IPR000157 GO:0007165
Arst2g02458 630 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 133 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02458 Arst-Chr2 78988252 78991866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02458 195 474 WRKY Transcription Factor Family AT5G45050 30.605 2.14e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02458 - - adu:110278245 1261.51