Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02454 ATGATATGTTGTAAAAACAAAACTCAAAAGGTGCTGCCAGTATTCTACCATATAGATCCCTCGGAAGTGCTAAATCAGACTGGTAATTTTGGACAAGCTTTTGATAATCTTATGAGAAGATACCCGGATAAAATAAAAGGTAAGGAGCAGAGTTGGAGGAAAGCACTCCGTGAAGTTGGGTGCATTGCAGGGTTTGTCATCCGAAAATCCAAGAATGAAAGTGAGGATATTAAGAACATTGTTGAACAAGTTACTCATATGCTGGAAATGAAGGAATTGTTCATTGCTAATCATCCCGTAGGAATTGAATCTCGTGTTGAAGAGGTGATTCAACTATTAAAAGACCAGCAACAAGAAAATCCTCTACTACTTGGTATATGGGGCATGGGAGGGAGTGGTAAAACAACCATTGCCAAAGAGGTTTATAATAAAATTTTCCGTGAGTTTGAAGGTCGGTGTTTCCTCCTAAATGTAAGAGAAGTTTGGGATCAAGATAATGGAATTCTTCATTTACAACAACAACTTCTTTCTGCTATCTACAAGACAACGAAAATAAAGATTGAAAACACTGAATCTGGAAAATCAATATTAGAGAGAAGACTTGGCCAGAAAAGGATACTTCTTGTACTTGATGATGTGGACAAATTGGAGCAGCTAAATTCTTTAGCTGCAAGCCGTAAATGGTTCTGTCCCGGTAGCATAATAATCATCACAACAAGAGACGAGCATCTTCTACGTTGTCTTAGAATTGACAAGTTATATGGTATGAAAGAGTTAAATGACAAAGAATCCATTGAACTTTTTAGCTGGCATGCATTCAAAGAACCATGTCCAAAAGAAGAGTTTGCTTCACTTGCTAATGAAGTTGTTTCATATTGTGAGAGATTGCCACTGGCTCTTGAGGTAATTGGGTCACATCTGTTTAATAGGAAAGTATATGAATGGAGGAGTGTTTTGAATAAACTCAAAACTATTCCAAACAATGATGTACATAAGAAGCTTAAAATAAGTTTTGATGGTCTAAGTGATGATAGGGATAGAGAAATATTTCTTGATGTAGCATTTTTCTTTATTGGGATGCACAAAAATGATGTAATTGATATATTAAATGGCTGCGGGCATTCAGCTGAAATTGGAATAAATGTTCTTATGGAACGATGCCTTATTACTGTGGACACTAAGGGAAAACTTGGCATGCATGGTTTGCTGCGAGACATGGGAAGAGAAATTATTCTTGAAAGTTTGCCAATGAAACCTGAGGAACGTAATAGGTTGTGGAATCCAGAGGAAGTGCTTAATGTATTATCAAAAGACATGGGAACAAAAGCTATTGAGGGGCTTGCCTTGAACCTGCCAAAGTCACTGAATCCAACTCAATTAAAGACGGAAGCATTTAAGGAGATAAAGAGACTCAGGTTGCTTCAGTTTGCGAATGTGCAACTTGTTGGAGACTTTAAATACCTTTCAACAGATCTTCGATGGTTGTGTTGGCATGAATGTCCTTCAGAATATACAACTGCAAACTTTGATCAAGGAAATCTAGTTGCTGTTGACTTCAAATATAGCAAACTTGAACTAGTATGGAAGAAGGGACAGATGATGAAGAATCTAAAAATTCTCAATCTTAGTCATTCTCAACACTTGGCACAAACTCCTGACTTTTCAAATATGCCCAATCTTGAAAAGTTAATACTCAAATATTGCCCAAAGTTGACTTGGGTTTCTCATACCATTGAACATCTCGAGCAAGTTCTTCTAATCAATTTGAAAGGGTGTTCAGGGCTTCGTGTACTTCCAAGAAGCATCTACAAGTTGAAATCTCTCAAAACTCTCATTCTTTCAGGATGTTCATCGATTGATAAGTTAGAAGAAGACATAGAACAAATGGAATCATTGACAACTTTGATGGCAGATAAAACTGCCATAACACAAGTGCCTCATGCACTACTAAGATTAAAGAGTATTGTGTATATTTCTTTGTGCGACTTTAAAGGATTATCGCGCAATGTGTTTCCTTCAATCATTTGGTCATGGACCTCTCCAACAAATAACTTCTCACCCCAAGTGCAAACATTTTTGGACTTGTTAAATCTTGTTTCCTTAATAGTACCAAATAGCAACTCTCAAGGCCTATCATCCATCATCAGAGAGCTTCCAAAGGTCCAGAATGTTAGGCTGGAATGTGGCTCACAACTTCAAATTATAGGAGATGTAGTTTCTAATACTTTTGATGTCACAAACTGCAATGAAATGAAAGAAACATCAAGTGCATCAAATATCTCAAAAGGGAGTAGCTCATCATTAATTGGTTACTGCAGTGAAGGTGACATTATTGAATCAGAAAATTCCTTGAATTCAATTTTAATTCAAATGGGAATGAGTTGTTCAGTCACAGAGTTACTTAGGGAAAATATTTTGCAGAAGTTTAATGCAAGAGTACCTGGAGATTGCTTGCTTCCTGGCAACAAGAATCCTGATTGGTTAACATTCAGTTGTGAAGGTTCTTTTGTAGTTTTTGACATCCCTCAGGTGAATGGGCATAAGTTACAGTCAGTGATGTTGTGTATCATCTACTCTTCTTCCTCAAACATTGTACCTTTAGAAGGCCCTATCATTAAAAATTTGTGTATCATAAATCATACAAAGACCACTCCTTTTCTCTACGATGGAGATACACTGGCTTCACTTAGAGATGATGAATGGCAGAAAGTAATAGCGAACCTTGAAGCTGGTGACAAAGTGCAGATTGTTGTTGCTTCCGGATTAGGATTCACTGTGAAGAAGACAGCAGTTTATCTCATATATGCAGAGCAACAAGCTGAAGGTATTGTTTGTGGTGATGATATGGTAGCAGATGGAAATATCATTGTTCATGATGGAGAAGAAAATGATTTACTTCAAGGAGTAAACAAGAATTTCTCAAAAGTAAGTGCTCATTGTCTAAATATCTACAAATGTTATTTTAAAAACACAATTTAG 2979 0.3666 MICCKNKTQKVLPVFYHIDPSEVLNQTGNFGQAFDNLMRRYPDKIKGKEQSWRKALREVGCIAGFVIRKSKNESEDIKNIVEQVTHMLEMKELFIANHPVGIESRVEEVIQLLKDQQQENPLLLGIWGMGGSGKTTIAKEVYNKIFREFEGRCFLLNVREVWDQDNGILHLQQQLLSAIYKTTKIKIENTESGKSILERRLGQKRILLVLDDVDKLEQLNSLAASRKWFCPGSIIIITTRDEHLLRCLRIDKLYGMKELNDKESIELFSWHAFKEPCPKEEFASLANEVVSYCERLPLALEVIGSHLFNRKVYEWRSVLNKLKTIPNNDVHKKLKISFDGLSDDRDREIFLDVAFFFIGMHKNDVIDILNGCGHSAEIGINVLMERCLITVDTKGKLGMHGLLRDMGREIILESLPMKPEERNRLWNPEEVLNVLSKDMGTKAIEGLALNLPKSLNPTQLKTEAFKEIKRLRLLQFANVQLVGDFKYLSTDLRWLCWHECPSEYTTANFDQGNLVAVDFKYSKLELVWKKGQMMKNLKILNLSHSQHLAQTPDFSNMPNLEKLILKYCPKLTWVSHTIEHLEQVLLINLKGCSGLRVLPRSIYKLKSLKTLILSGCSSIDKLEEDIEQMESLTTLMADKTAITQVPHALLRLKSIVYISLCDFKGLSRNVFPSIIWSWTSPTNNFSPQVQTFLDLLNLVSLIVPNSNSQGLSSIIRELPKVQNVRLECGSQLQIIGDVVSNTFDVTNCNEMKETSSASNISKGSSSSLIGYCSEGDIIESENSLNSILIQMGMSCSVTELLRENILQKFNARVPGDCLLPGNKNPDWLTFSCEGSFVVFDIPQVNGHKLQSVMLCIIYSSSSNIVPLEGPIIKNLCIINHTKTTPFLYDGDTLASLRDDEWQKVIANLEAGDKVQIVVASGLGFTVKKTAVYLIYAEQQAEGIVCGDDMVADGNIIVHDGEENDLLQGVNKNFSKVSAHCLNIYKCYFKNTI 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02454 992 Gene3D - 78 251 IPR027417 -
Arst2g02454 992 SUPERFAMILY L domain-like 458 734 - -
Arst2g02454 992 ProSiteProfiles TIR domain profile. 1 88 IPR000157 GO:0007165
Arst2g02454 992 SUPERFAMILY "Winged helix" DNA-binding domain 330 435 IPR036390 -
Arst2g02454 992 Pfam TIR domain 3 88 IPR000157 GO:0007165
Arst2g02454 992 PRINTS Disease resistance protein signature 603 619 - -
Arst2g02454 992 PRINTS Disease resistance protein signature 293 307 - -
Arst2g02454 992 PRINTS Disease resistance protein signature 123 138 - -
Arst2g02454 992 PRINTS Disease resistance protein signature 200 214 - -
Arst2g02454 992 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 352 IPR027417 -
Arst2g02454 992 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 64 IPR035897 -
Arst2g02454 992 Gene3D - 258 342 IPR042197 -
Arst2g02454 992 Gene3D Ribonuclease Inhibitor 456 775 IPR032675 -
Arst2g02454 992 Coils Coil 619 639 - -
Arst2g02454 992 SMART AAA_5 120 255 IPR003593 GO:0016887
Arst2g02454 992 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 757 IPR044974 GO:0006952
Arst2g02454 992 Pfam NB-ARC domain 103 328 IPR002182 GO:0043531
Arst2g02454 992 Gene3D - 1 59 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02454 Arst-Chr2 78932226 78938476 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02454 11 652 WRKY Transcription Factor Family AT4G12020 29.803 5.14e-69 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02454 - - ahf:112727920 1684.46